Gene Information

Name : Cwoe_1413 (Cwoe_1413)
Accession : YP_003393216.1
Strain : Conexibacter woesei DSM 14684
Genome accession: NC_013739
Putative virulence/resistance : Resistance
Product : D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1052
EC number : -
Position : 1482065 - 1483105 bp
Length : 1041 bp
Strand : +
Note : PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bvi:Bcep1808_0762 D-isomer specific 2- hydroxyacid dehydrogenase, NAD-binding

DNA sequence :
ATGATCCGCAGCGAACCAGCACCACCAGCGGCCCGCCGCATCCGATCGCCAGCGTCCTCGCCCTCCTCGGCGGCCTCGAC
CACGGGGATCACGGTCTACGGCTGCGGGGAGGACGAGGCCGCCGTGTTCGGAGCGATGGCGCCCCGCCTCGGCGTCGTGC
CGACGATCACCGAGGAAGCGGTGGCCGAAGGCACCGTCGACTTGGCGCGCGGGAACCGCTGCATCAGCATCGGTCACAAG
ACGCACGTCACGAACTCCACGCTTCGTGCGCTCAGCGAAGCTGGTGTGAGGTACATCTCCACGCGAAGCGTCGGATGCAA
CCACGTCGACGTGCATCACGCACGGAGCGTGGGCATCGCCGTCGAGACCGTCGCCTACTCGCCGGACAGCGTGGCCGACT
ACACGCTGATGCTGATGCTGATGGCGGTGCGACACGCGAAGTCCGTCATCAGGCGTGCAGACGTTCATGACTACACGCTG
AGCGGCATCCGCGGGAAGGAGCTGCGCGACCTGACCGTCGGGGTGATCGGGACGGGACGGATCGGCGGCGCGGTCATCGA
CCGGCTGAGCGGGTTCGGCTGCCGAACGCTCGCCCATGACACGCGGCCCACGACTGCGGCCGACTACGTCGCGCTCGGCG
CATTGCTCGAGCAGAGCGACATCGTCACGCTCCATACGCCACTCACCGCGGAGACGCACCATCTGCTCGATCGCAGGCGG
ATCGAGCGGATGAAGCACGGCGCGGTGGTCGTCAACACGGGACGCGGCGCCCTTGTCGACACCGAGGCGCTGGTCTCGGC
CTTGGAACGCGGCAGCTTGGGCGGCGCGGCGCTGGACGTCCTCGAAGGAGAGGAAGGGATCTTCTACGCCGACTGCAGCG
ACAGGCCGATCGAAAGCCCGTTGCTGCTGCGATTGCACACGCTGCCGAATGTGCTGATCACGCCGCACACCGCCTACTAC
ACCGACCACGCCTTGAGCGACACCGTCGAGAACAGCCTGATCAATTGCCTGCGCTTCGAAGGCAGAGACCAGCATGCATA
G

Protein sequence :
MIRSEPAPPAARRIRSPASSPSSAASTTGITVYGCGEDEAAVFGAMAPRLGVVPTITEEAVAEGTVDLARGNRCISIGHK
THVTNSTLRALSEAGVRYISTRSVGCNHVDVHHARSVGIAVETVAYSPDSVADYTLMLMLMAVRHAKSVIRRADVHDYTL
SGIRGKELRDLTVGVIGTGRIGGAVIDRLSGFGCRTLAHDTRPTTAADYVALGALLEQSDIVTLHTPLTAETHHLLDRRR
IERMKHGAVVVNTGRGALVDTEALVSALERGSLGGAALDVLEGEEGIFYADCSDRPIESPLLLRLHTLPNVLITPHTAYY
TDHALSDTVENSLINCLRFEGRDQHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2295 NP_815952.1 D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 4e-85 57
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 1e-83 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cwoe_1413 YP_003393216.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein AF155139.2.orf4.gene Protein 3e-95 61
Cwoe_1413 YP_003393216.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein NC_005054.2598279.p0 Protein 1e-92 58
Cwoe_1413 YP_003393216.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein NC_014475.1.orf2.gen Protein 1e-92 58
Cwoe_1413 YP_003393216.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein U35369.1.gene5.p01 Protein 2e-84 57
Cwoe_1413 YP_003393216.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein AF310956.2.orf4.gene Protein 3e-84 57
Cwoe_1413 YP_003393216.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein FJ349556.1.orf3.gene Protein 2e-88 57
Cwoe_1413 YP_003393216.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein AF130997.1.orf3.gene Protein 2e-77 55