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Name : Slin_6390 (Slin_6390) Accession : YP_003391147.1 Strain : Spirosoma linguale DSM 74 Genome accession: NC_013730 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 7743954 - 7745705 bp Length : 1752 bp Strand : - Note : KEGG: gsu:GSU2271 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGCTGCTGAGTGAACAGGAAATAAATCGCCGACAAAAGCGCGAAGAATTAATGCGGATGGGCATTGACCCCTACCCCGC CGAGTTGTTTGACGTAACCACGACCATCGCCGACATTCGGGCAGCCTTAACGGGCACTGAACCCGAAACAGACCTCGCCA GCGACGAGCGTTGGGGAAATGTTCAATTAGCGGGTCGGCTGATGGTATTCCGCATCAGTGGCAGCGCGTCGTTCGCCGAA ATACAGGACTCCACCGGCCGGATGCAGTTTTATTTCCGGCGCGATGACCTCTGCCCCGGCGAAGACAAAACGCTTTATAA CACTGTCTTTAAAAAACTGCTGGATATTGGCGACATTATTGGCGTGAAGGGCCATGTATTCACCACAAAAACCGGTGAAC TGTCGGTATATGTCAAAGAGTTCAAAATCCTCAACAAAGCCCTGCGTCCTTTGCCAGTGGTGAAAGAGGTAGTGAATGAG AAAGGTGAAAAAGAAACCTACGATGCCTTTACCGACCCCGAACAGCGGTATCGCCAACGTTATGTAGACCTGATTGTGAA CCCACAAGTGCGCGATGTTTTTATAAAGCGTACCAAACTGGTCAACTCGATTCGGCAGTTCCTGAGCGAAAAAGGCTACC TGGAAGTAGAGACGCCCATTTTACAGCCCATTCATGGCGGAGCTGCAGCCCGGCCGTTTCGCACGCACCACAACTCACTG GATATGACGCTGTATATGCGCATTGCCAATGAGCTTTACCTCAAACGCCTGATCGTTGGCGGATACGACGGCGTATTCGA GTTTGCCAAGGACTTCCGAAACGAGGGAATGGACCGTACCCATAACCCCGAGTTTACGCAGGTGGAGTTCTATGTTGCCT ACAAAGATTATCTGTGGATGATGGATACCATCGAGGAGATGGTGGAAAAAGTAGCCCTGGATGTAGCCGGAACAACGAAA GTTACCGTTGGCGAAAACGTCATCGACTTCAAACGCCCCTGGAAACGCCTGACCATGTTCGAGGCCATTCAGGAATATAC CGGCGTGGATGTATCGGCCATGGAAGAGGATGAACTACGGCAGGTAGCCGAACAGCGGGGTATTAAGGTAGACAGCACCA TGGGTAAGTCGAAACTCATCGATGAACTGTTTGGCGATGCCTGTGAACCCAATCTGATTCAGCCGACATTCATTACCGAC TACCCCGTTGAGATGTCGCCCCTGACCAAGAAGCACCGGAGCAAGCCGGGTTTGGTTGAGCGGTTCGAAGCCATTTGTAA CGGCAAGGAAATTGCCAACGCCTACTCCGAGCTAAACGACCCCATCGACCAGCGCGAGCGGTTTGAGGAACAGTTGCGCC TGGCCGAACGGGGTGACGAAGAAGCGATGGCGCTTGACGAAGATTTCCTGCGGGCACTCGAATACGGGATGCCGCCAACG GCGGGCGTGGGTCTGGGTATTGACCGGCTCTCGATGATTATGACCAACCAATCGTCTATTCAGGATGTGCTATTCTTCCC GCAGATGCGTCCCGAGAAGAAGCAGGAGCAGTCGGACGAAAGCGAGTTCATTACCGCCGGTGTTCCGGCCGAGTGGATAC CCGCCGTTCAGAAGCTTGGCTTTATGAGCGTCGACCAACTTAAGGGGGCCAATCCCAACAAGTTGTTCAACGATCTGGGT GGCGTTCGTAAAAAGTTGAAACTGGAAGCCAAAATGCCCACCCTGGATGAAGTAAAGGGGTGGATTGGTTAG Protein sequence : MLLSEQEINRRQKREELMRMGIDPYPAELFDVTTTIADIRAALTGTEPETDLASDERWGNVQLAGRLMVFRISGSASFAE IQDSTGRMQFYFRRDDLCPGEDKTLYNTVFKKLLDIGDIIGVKGHVFTTKTGELSVYVKEFKILNKALRPLPVVKEVVNE KGEKETYDAFTDPEQRYRQRYVDLIVNPQVRDVFIKRTKLVNSIRQFLSEKGYLEVETPILQPIHGGAAARPFRTHHNSL DMTLYMRIANELYLKRLIVGGYDGVFEFAKDFRNEGMDRTHNPEFTQVEFYVAYKDYLWMMDTIEEMVEKVALDVAGTTK VTVGENVIDFKRPWKRLTMFEAIQEYTGVDVSAMEEDELRQVAEQRGIKVDSTMGKSKLIDELFGDACEPNLIQPTFITD YPVEMSPLTKKHRSKPGLVERFEAICNGKEIANAYSELNDPIDQRERFEEQLRLAERGDEEAMALDEDFLRALEYGMPPT AGVGLGIDRLSMIMTNQSSIQDVLFFPQMRPEKKQEQSDESEFITAGVPAEWIPAVQKLGFMSVDQLKGANPNKLFNDLG GVRKKLKLEAKMPTLDEVKGWIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-97 | 47 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Slin_6390 | YP_003391147.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-97 | 47 |
