Gene Information

Name : Slin_0064 (Slin_0064)
Accession : YP_003384936.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit beta
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 80121 - 82280 bp
Length : 2160 bp
Strand : +
Note : TIGRFAM: K+-transporting ATPase subunit beta; ATPase P; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: potassium-transporting atpase b chain (potassium- translocating atpase b chain)

DNA sequence :
ATGTCAACCCAAAAATCATCCCCGGCCGGACGCGGCACCGCCCTATTCCAGCGCGAGCTTGTGAGCACGGCTATTCGGGA
GTCATTTCTCAAACTTAACCCGGCTATTCTGAGTAAGAATCCGGTCATGTTCACCGTCGAAATTGGTACTGTTGTGATGG
TGCTGGTTACGGCCTACATCGCCATTACGGGCGATACAAGCCAAGGGTCTCTGGGCTATAATGTGTCCATTACGCTGATC
CTATTGCTGACGATTTTGTTCGCTAACTTCGCCGAGGCCATTGCCGAAGCGAGGGGAAAAGCCCAGGCCGAATCGCTCCG
TAAAACGCGTCAGGAAACACCCGCTAAAGTGATTCGGCGGGGCGGCCCTCCGTCAGTTGGAAATATATACACCGACGAAG
TGCAGATTATTTCCTCCGCTCAACTCGTGAAAGGCGATGTGTTTCTCTGCGAACCGGGCGATATTATTCCGTCGGATGGC
GAAATCATCGAAGGACTGGCAACCATCGACGAGTCGGCCATAACGGGCGAATCGGCCCCGGTAATCCGGGAAGCGGGTGG
CGATAAATCATCCGTGACGGGGGGCACGAAAGTGCTGTCGGACCGGATAAAAGTGCAGGTGACTACGCAGCCGGGGGAGT
CGTTTCTGGATAAAATGATCGCGCTGGTTGAAGGGGCTACGCGGCAGAAAACACCCAACGAAATCGCTCTGACGATTCTG
CTGGCCGGTTTTACTTTGATCTTTATTATCGTCTGCGTGGCCCTGAAACCCTTCGCCGATTACGCCAATACGCCCATTAC
CATAGCCGCCCTGATCTCGCTGTTCGTATGCCTGATTCCAACCACCATTGGCGGACTCTTATCGGCCATTGGTATTGCGG
GGATGGACCGGGCACTACGGGCCAATGTCATTGCTAAATCGGGCCGGGCGGTTGAAACGGCGGGCGACATCGACACGCTG
CTGCTTGATAAAACGGGAACAATCACCATCGGCAACCGCAAAGCCACGAATTTTTACCCCGCACCGGGTGTCTCGGAAGC
CGATATGGTGCGGGCGTCGGCGCTGAGTTCACTGGCCGACGAAACCCCCGAAGGAAAGTCTATAGTGGAACTGGCGAAAA
AAATGAATAATGTACAATGGTCAATGACCAATGATCAATTTCATTTTCAAATAGGGGATAGCCAGAGCACGCTTCATTAT
CCATTGTCAATTATTCATTTTGTAAAGTTCACGGCCGAAACGCGTTCGTCGGGAATCGATATGCCTGCCGGAGTGAATGG
TTCGCCGGTGCGGATTCGGAAAGGCGCGACGGATTCCATTCGGAACATCGTGACGAAAGCGGGTAATCTGTTCCCAATCG
AAACGGAAAACCAGGCAAAGGAAATTGCGGGCAACGGCGGCACACCACTCGTTGTCATCGAAAACGAACAGGTACGGGGC
GTTGTCGAATTGCAGGATATTATCAAACCCGGCATTTCGGAACGCTTCGACCGGCTGCGAAAAATGGGCGTAAAAACCGT
GATGGTGACGGGAGATAACCCATTGACTGCCAGGTTTATCGCCGAAAAAGCGGGAGTCGATGATTACATCGCCGAAGCCA
AACCGGAAGATAAGATGAACTACATCCGCCATGAGCAAACGGGCGGTAAACTGGTAGCTATGATGGGCGACGGCACCAAC
GACGCTCCCGCGCTGGCCCAGGCTGATGTAGGTGTGGCGATGAACTCCGGCACCCAGGCCGCCAAAGAAGCCGGGAATAT
GGTCGACCTCGACAACGACCCCACCAAGCTGATTGAGGTGGTTGAAATAGGGAAGCAGTTGCTCATTACACGCGGCACAC
TCACGACCTTTTCGATTGCCAACGACGTGGCCAAGTATTTCGCCATTGTGCCTGCCCTGTTCGTGGTGTCGATCCCGGCC
TTGCAGGCTATTAACATCATGCGACTGCACAGCGCCGAGTCGGCGATTCTGTCGGCGGTGATTTTCAACGCAATCATCAT
TCCGATGCTCATTCCGTTAGCCCTGCGCGGGGTCGAGTACAAACCCATTGGCGCATCGGCCCTGCTCCGCCGTAACCTGT
TCATCTACGGTCTGGGTGGGATTGTAGCCCCGTTCATCGGAATTAAATTGATTGATTTGGTAGTTGGGTTGTTCGTGTAG

Protein sequence :
MSTQKSSPAGRGTALFQRELVSTAIRESFLKLNPAILSKNPVMFTVEIGTVVMVLVTAYIAITGDTSQGSLGYNVSITLI
LLLTILFANFAEAIAEARGKAQAESLRKTRQETPAKVIRRGGPPSVGNIYTDEVQIISSAQLVKGDVFLCEPGDIIPSDG
EIIEGLATIDESAITGESAPVIREAGGDKSSVTGGTKVLSDRIKVQVTTQPGESFLDKMIALVEGATRQKTPNEIALTIL
LAGFTLIFIIVCVALKPFADYANTPITIAALISLFVCLIPTTIGGLLSAIGIAGMDRALRANVIAKSGRAVETAGDIDTL
LLDKTGTITIGNRKATNFYPAPGVSEADMVRASALSSLADETPEGKSIVELAKKMNNVQWSMTNDQFHFQIGDSQSTLHY
PLSIIHFVKFTAETRSSGIDMPAGVNGSPVRIRKGATDSIRNIVTKAGNLFPIETENQAKEIAGNGGTPLVVIENEQVRG
VVELQDIIKPGISERFDRLRKMGVKTVMVTGDNPLTARFIAEKAGVDDYIAEAKPEDKMNYIRHEQTGGKLVAMMGDGTN
DAPALAQADVGVAMNSGTQAAKEAGNMVDLDNDPTKLIEVVEIGKQLLITRGTLTTFSIANDVAKYFAIVPALFVVSIPA
LQAINIMRLHSAESAILSAVIFNAIIIPMLIPLALRGVEYKPIGASALLRRNLFIYGLGGIVAPFIGIKLIDLVVGLFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-145 55
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-146 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-145 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-144 54
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-144 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-144 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-144 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-144 54