Gene Information

Name : Slin_5661 (Slin_5661)
Accession : YP_003390425.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 6896663 - 6897124 bp
Length : 462 bp
Strand : +
Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: atu:Atu1025 SsrA-binding protein

DNA sequence :
ATGGCTACCGCTTCTATAGTTAAACAAGTTGATATTCGTAATCGTCGGGCTTCCTTTGAGTATTCGTTTCTTGAAACTTA
TACGGCCGGTATTGTCCTGACGGGTACCGAAATAAAGTCCGTTCGGCAGGGGAAAGTAAACTTGCAGGACGCTTACTGCC
TGATTCATGGTGATGAGCTGTTTATCCGCCAGATGAGCATATCCATTTATACTGAAGGCACGCACTATAATCATGAACCC
CTTCGGGATCGTAAACTGCTGCTGACAAAGCGTGAAATCAGGCGGCTTACTGAGAAGTTGAAAGACCAGGGACTCACCAT
TGTGCCCATTCGTATGTTCACAAGCGAGCGGGGTTTTGCTAAAGTGGAAATAGCCCTCGCAAAGGGTAAAAAATTATACG
ACAAACGAGATAGCATTAAGGAGCGTGACGTAGAACGGGAGATGCAGCGGGAACGGTATTAA

Protein sequence :
MATASIVKQVDIRNRRASFEYSFLETYTAGIVLTGTEIKSVRQGKVNLQDAYCLIHGDELFIRQMSISIYTEGTHYNHEP
LRDRKLLLTKREIRRLTEKLKDQGLTIVPIRMFTSERGFAKVEIALAKGKKLYDKRDSIKERDVEREMQRERY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 4e-26 48
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-29 46