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Name : Slin_5630 (Slin_5630) Accession : YP_003390394.1 Strain : Spirosoma linguale DSM 74 Genome accession: NC_013730 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 6859273 - 6860544 bp Length : 1272 bp Strand : - Note : KEGG: gme:Gmet_3528 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGCTGCAACTTAATTTTATCCGCGAGAATAAAGACACTGTGCTGGCGGGACTTGGCAAACGATACTTCGCCAATGCCGA AACGGTAGTCGACAATGTGATGACGCTCGACCAGAAACGGCGCGATACCCAAAAAGAACTGGACGATGTATTGGCTCAGT CCAACGCCAAAGCCAGTCAGATCGGGGCTTTGATGAAGTCGGGCGATAAAGCCGCTGCCGAAGCCGCCAAAGCTGAAACG GCTGAACTGAAAGTCCGGTCGAAAGACCTTGCCGAAGCGCTTCGCCAGATAGAAGTTGAGTTGCAGGCCGTGCTCGTCAC CATCCCGAACATTCCGCATAGCAGCGTTCCGCCCGGCCGCAGTGCCGACGATAACGAAGTGGTGCTGGAACATGGCGACA AGCCCACGCTTCATGAGGCTGCACAACCGCACTGGGAGCTGATCAAGAAGTACGATATAATTGACTTCGAGCTGGGCGTG AAGATTGCCGGAGCGGGGTTTCCTGTCTACAAAGGCAAAGGAGCCCGGATTCAGCGGGCGATGATCAACTTCTTCCTCGA CGAAGCCCTGAAAGCCGGTTACGTAGAAGTACAACCACCCATTCTGGTGAACGAAGATTCGGGCTTCGGCACGGGTCAGT TGCCTGATAAAGAAGGACAGATGTACTTCGCCACCGAGGATAAGCTGTACCTGATTCCAACCGCCGAGGTACCCATTACG AACATCTACCGCGACGTGATTCTGAACGAAAATCAGTTGCCGGTGAAGAATGTAGGTTATACGCCTTGTTTCCGTAGGGA AGCGGGTTCGTGGGGTGCTCACGTGCGTGGATTGAACCGACTGCACCAGTTCGATAAAGTTGAAATTGTGCGCATCGAAC GGCCCGAGAACTCCTACGCAGCTCTGGAAGAAATGAGCTTACACGTTCAGAGCCTGCTGCAGAAGCTGGAACTCCCCTAC CGCGTTTTACGCCTGTGCGGGGGCGACATGGGCTTCACCTCAGCGCTCACCTACGACATGGAAGTATGGTCGGCGGCACA GCAACGCTGGCTCGAAGTAAGCTCCGTCTCGAACTTCGAAACCTATCAGGCTAACCGGCTGAAACTGCGTTCGAAACTAG AGGGAAAAATGCAGCTTATGCACACGCTGAACGGCTCGGCGCTGGCACTGCCACGTATTCTGGCGTCCATTCTGGAAAAT AACCAAACGCCTGAAGGCATCAAAATACCGCAAGTGCTGGTGCCGTATTGTGGGTTTGACGTGATTGATTAG Protein sequence : MLQLNFIRENKDTVLAGLGKRYFANAETVVDNVMTLDQKRRDTQKELDDVLAQSNAKASQIGALMKSGDKAAAEAAKAET AELKVRSKDLAEALRQIEVELQAVLVTIPNIPHSSVPPGRSADDNEVVLEHGDKPTLHEAAQPHWELIKKYDIIDFELGV KIAGAGFPVYKGKGARIQRAMINFFLDEALKAGYVEVQPPILVNEDSGFGTGQLPDKEGQMYFATEDKLYLIPTAEVPIT NIYRDVILNENQLPVKNVGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVRIERPENSYAALEEMSLHVQSLLQKLELPY RVLRLCGGDMGFTSALTYDMEVWSAAQQRWLEVSSVSNFETYQANRLKLRSKLEGKMQLMHTLNGSALALPRILASILEN NQTPEGIKIPQVLVPYCGFDVID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-72 | 44 |
