Gene Information

Name : Slin_5018 (Slin_5018)
Accession : YP_003389794.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 6115976 - 6116905 bp
Length : 930 bp
Strand : +
Note : KEGG: dol:Dole_0963 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase

DNA sequence : 
ATGCATATCCGAATTGGTACACGAAGTAGCCGCCTGGCCGTATGGCAGGCCGAACATATACAGGCATTACTCGAAAAAGG
GGGCCTTACCTCCGAACTAGTCCTGATTGAAACTAAAGGCGATCTGGTCCTCGACCGCTCATTAGCCAAGATTGGTAGTA
AAGGTGTTTTTACGCAGGAACTGGAAGATCAGCTTCGGTCAGGCACCATTGATATCGCCGTTCACAGCGCCAAAGATTTG
CCCTCCAACCTTCCGGCCGATCTGCACATCATTGCCTTCACCGAACGAGAGCCCGCCAACGATGTTCTCGTTAGCCGTAA
TAAATCGCTTTCCCTACAGGGTGGCGAATCATTTCGGATCGGCACCTCGTCAACGCGCCGGGTAGCGATGCTTAAACATT
ATTGTCCGCAACTGGCTACGGTCGATATGCGGGGCAACCTCCAAACCCGAATTCGTAAACTCGACGAAGGCCATTGCGAT
GCCTTGCTGCTGGCCTACGCGGGTGTGCACCGTATGGGTTACGACGACCTGATTGTAGAACGCCTGCCACTGGACGAGTT
TACCCCAGCCGTTGGGCAGGGTAGTATTGCCATTGAAGTGGCGACAGATGCTCTGAAAAGTGACATAGCCGAAGCGATTA
CGCGCCTGATCAACCATGAGCCTACGGCAGCCTGCCTACGGGCCGAACGGGCTTTTCTGGCCCGGCTTGAGGGAGGTTGC
AGCATTCCATCCTTTGCACTCGCCCAATGGACGGACGATACAACCGTTAGCCTAACGGGCGGACTGGTAAGTCTGGATGG
GAGTCAACTCCTGCGCGAAACCTTTTCGGGCTCCGCACAGGAATCTCACCTACTGGGCCATTCACTGGCCGAAGCCATTC
TGGCACGCGGGGGCGATACCCTGTTACTCGATATTCGCGCACAACTATGA

Protein sequence : 
MHIRIGTRSSRLAVWQAEHIQALLEKGGLTSELVLIETKGDLVLDRSLAKIGSKGVFTQELEDQLRSGTIDIAVHSAKDL
PSNLPADLHIIAFTEREPANDVLVSRNKSLSLQGGESFRIGTSSTRRVAMLKHYCPQLATVDMRGNLQTRIRKLDEGHCD
ALLLAYAGVHRMGYDDLIVERLPLDEFTPAVGQGSIAIEVATDALKSDIAEAITRLINHEPTAACLRAERAFLARLEGGC
SIPSFALAQWTDDTTVSLTGGLVSLDGSQLLRETFSGSAQESHLLGHSLAEAILARGGDTLLLDIRAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-41 43
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-41 43