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Name : Slin_4881 (Slin_4881) Accession : YP_003389658.1 Strain : Spirosoma linguale DSM 74 Genome accession: NC_013730 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 5946776 - 5948002 bp Length : 1227 bp Strand : + Note : PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0003129 probable transporter permease DNA sequence : ATGTCTTCCAAACGTACGGCTCCGGCCCTGGTTTTCATTTTTATTACGCTCCTCATTGATGTTACGGGGCTGGGCATTAT CATCCCGGTTTTTCCGAAACTGATTGAACAACTCATTCACGGCAACATTAGCCAGGCAGCAAGCTGGGGCGGCTGGCTGT CCTTTTCGTATGCCGCCATGCAATTTCTCTTTTCGCCGATTCTGGGCGGTCTGAGTGATCGCTTCGGCCGTCGGCCGGTG TTGCTGTTCTCGCTGTTTGGCTTTGGACTCGATTACATTCTTCAGGGTTTTGCCCCCACCATCGAATGGCTCTTTGTCGG GCGGTTGCTGGCGGGTGTTACCGGAGCCAGTTTTACGACGGCCACGGCTTACATTGCCGACATTAGTACGCCCGAAAAGC GGGCACAGAACTTCGGACTTATTGGAGCTGCCTTTGGCGTAGGCTTTATTCTTGGCCCGGCCGCCGGTGGTTTTCTGGGT CAATACGGCCCTCGGGTACCGTTCTTCGTAGCCGCCGGTCTCACTATGGTCAACTTTCTCTACGGTCTGTTTATCCTGCC CGAATCGCTCGCACCCGAAAATCGGCGGCCTTTCGACTGGCGACGTGCCAATCCCATTGGCTCGCTCATGCGGCTGGGTA AGTATCCCGTTATCCTTGGCCTGGTAGCCTCGCTGGTGCTGGTGTACATTGCGGGATTTGCCGTACAGGGCACCTGGACA TTCTACTCCATGGAGAAGTTCAAGTGGGATGAGAAAACCGTTGGCCTCTCGCTGGCGGCCATTGGTCTCTCCTTTGCCAT TGTACAGGGCGGGCTAAGTCGAATCATCATCCCGAAACTGGGGCCGCAGCGCTCGGTTTACATTGGCCTTACGTTCAGCG CCATTGGTTTTTTACTGTTTGCCATTGCTACCCAAAGCTGGATGATGTTCGCTTTTATGATGGTGTATGCCATGGGCGGT ATTGCCGGACCTTCTATTCAGGGAATTATTTCGAATCAGGTACCCGCCAATGAGCAGGGCGAGTTACAGGGAGCACTCAC CAGCCTGACCAGTACGACCTCTATTTTCGGGCCACTCATTATGACGAATCTGTTCTCGTTTTTTACCTCACCGGCGGCAC CGGTCTACCTGCCCGGAGCACCGTTCTATCTGGCTTCAGTGCTGGTCATTATCAGCGCTATCCTATCCCGGCGCGGGCTG AACCGCAGTCTGGCTACCAGCGACTAA Protein sequence : MSSKRTAPALVFIFITLLIDVTGLGIIIPVFPKLIEQLIHGNISQAASWGGWLSFSYAAMQFLFSPILGGLSDRFGRRPV LLFSLFGFGLDYILQGFAPTIEWLFVGRLLAGVTGASFTTATAYIADISTPEKRAQNFGLIGAAFGVGFILGPAAGGFLG QYGPRVPFFVAAGLTMVNFLYGLFILPESLAPENRRPFDWRRANPIGSLMRLGKYPVILGLVASLVLVYIAGFAVQGTWT FYSMEKFKWDEKTVGLSLAAIGLSFAIVQGGLSRIIIPKLGPQRSVYIGLTFSAIGFLLFAIATQSWMMFAFMMVYAMGG IAGPSIQGIISNQVPANEQGELQGALTSLTSTTSIFGPLIMTNLFSFFTSPAAPVYLPGAPFYLASVLVIISAILSRRGL NRSLATSD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 1e-47 | 42 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 1e-47 | 42 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 1e-47 | 42 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 1e-47 | 42 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 7e-49 | 41 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 1e-55 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 7e-56 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 4e-63 | 43 |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | NC_011586.7045189.p0 | Protein | 4e-52 | 41 |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | NC_010410.6002612.p0 | Protein | 4e-49 | 41 |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | AF133140.gene.p01 | Protein | 4e-49 | 41 |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | AF090987.gene.p01 | Protein | 9e-50 | 41 |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | Y19116.gene.p01 | Protein | 4e-46 | 41 |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 4e-56 | 41 |
| Slin_4881 | YP_003389658.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 4e-56 | 41 |
