Gene Information

Name : Slin_4852 (Slin_4852)
Accession : YP_003389629.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 5911247 - 5911990 bp
Length : 744 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; KEGG: tau:Tola_2684 IstB domain protein ATP-binding protein

DNA sequence : 
ATGAATAACCAAGCGACACTTGACCGACTACGGGACCTTAAACTGGTGGGCATGTATCAGGCCTTCGAGACCCTGCTTCG
CCTACCCCTTCACCAGCAACCGCCTGCCGACGAACTGCTGGCCCAGCTTACTGAAGCTGAACATGAGTACCGTCAACACC
GACGCACCCAGATGGCCATCCGGGCGGCCCGCTTTCGCTATCAGGCCTCGCTGGAAGAGTTGCACTACGGCCCTGGCCGC
AACCTGGATAAGACGCTGGTGCTTCGTTTGGCCGACTGCCGCTTCATCGATCGAGCCGAGAATATCTTCCTGACGGGATC
AACTGGCTGCGGCAAAAGTTACGTGGCTTCGGCCCTGGGCTATCAGGCCTGTCAGCTGGGGTATCGGGTGGGTTATCACA
ATCTGATCCGGCTCATACAGCGACTGCAACTGGCTAAAGCCGACGGCTCCTACCAGCGGGAGATGAGTCGTCTGGAGCGG
CAACACCTGCTCATTCTGGATGACTGGGGCTTACAACCCCTTGATCAGAATGGCCGATTGGCCCTGTTACAGATCATGGA
GGACCGGCATGGCAAGGCCGCTACGATCATCACCTCGCAACTGCCGGTGAGTAAATGGCACGAATACATCGACGATCCTA
CCTTGGCCGATGCCATCCTGGACCGGCTAACTCACAAGGCTCATCGGATGGAGTTGAAGGGTGAATCGATGCGACGCAAG
CAAAGTCTTGCGGCTGAGAAATAA

Protein sequence : 
MNNQATLDRLRDLKLVGMYQAFETLLRLPLHQQPPADELLAQLTEAEHEYRQHRRTQMAIRAARFRYQASLEELHYGPGR
NLDKTLVLRLADCRFIDRAENIFLTGSTGCGKSYVASALGYQACQLGYRVGYHNLIRLIQRLQLAKADGSYQREMSRLER
QHLLILDDWGLQPLDQNGRLALLQIMEDRHGKAATIITSQLPVSKWHEYIDDPTLADAILDRLTHKAHRMELKGESMRRK
QSLAAEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 1e-36 43
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 8e-37 43
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 8e-37 43
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 2e-35 42