Gene Information

Name : Slin_4835 (Slin_4835)
Accession : YP_003389612.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 5888497 - 5889102 bp
Length : 606 bp
Strand : +
Note : PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: xac:XACb0071 Tn5045 resolvase

DNA sequence :
ATGAAGTTAGGTTACGCCCGAGTCTCTACACAAGATCAAAATCTAGCGCTTCAGTTAGATGCCTTGAAAGCTGCTGGCTG
CTCGAGAATTTTTCAGGAGAAAGCGAGTGGGTCTAAAACCGAACGGCCGGAGTTAAAAAGGCTACTAGAAATCATCCGGG
AGGGCGACACGTTGATGATCTGGAAACTGGATCGACTAGGTCGGTCATTGAATCATTTAATCGAGATTGTTACTCAACTA
GAAGAGCAACATATTGGGTTAGTCAGTCTGAACGACCCCATCGACACCACGACGGCTCAAGGCCGACTAGTTTTTCGGAT
TTTCGCCAGTTTAGCCGAGTTTGAGCGGGAGGTGATTCGGGAGCGGACTTTGGCCGGTTTAGCCTCTGCCCGACGACGGG
GGCAACTCTTAGGCCGACGTAAAGGGCTATCCAAAGCCGGTGAGCAGAAAGCCCGCATTGGCGAAAGCCTTTACAAAGAG
GCCAAGTACTCGGTCGAACAAATTGCCCGCGAATTACACATTTCTAAAACCACCCTGTATAAGTATCTACGCATACGCGG
GGTTGAAATTGGTATTTCAGTCCAAAACCAAACGGCTACCACTTAG

Protein sequence :
MKLGYARVSTQDQNLALQLDALKAAGCSRIFQEKASGSKTERPELKRLLEIIREGDTLMIWKLDRLGRSLNHLIEIVTQL
EEQHIGLVSLNDPIDTTTAQGRLVFRIFASLAEFEREVIRERTLAGLASARRRGQLLGRRKGLSKAGEQKARIGESLYKE
AKYSVEQIARELHISKTTLYKYLRIRGVEIGISVQNQTATT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF35059.1 resolvase Not tested SGI1 Protein 2e-29 51
res AGK06929.1 resolvase Not tested SGI1 Protein 2e-29 51
res AGK06966.1 resolvase Not tested SGI1 Protein 2e-29 51
res AGK07012.1 resolvase Not tested SGI1 Protein 2e-29 51
res AGK07070.1 resolvase Not tested SGI1 Protein 2e-29 51
res AAK02044.1 resolvase Not tested SGI1 Protein 2e-29 51
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 2e-29 51
res AGF34985.1 resolvase Not tested SGI1 Protein 2e-29 51
res AGF35025.1 resolvase Not tested SGI1 Protein 2e-29 51
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 4e-25 50
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 5e-25 50
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 5e-25 50
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 4e-25 44
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 6e-26 44
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 6e-26 44