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Name : Slin_4384 (Slin_4384) Accession : YP_003389164.1 Strain : Spirosoma linguale DSM 74 Genome accession: NC_013730 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 5319780 - 5321120 bp Length : 1341 bp Strand : + Note : KEGG: cja:CJA_3061 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: xylose isomerase DNA sequence : ATGTCAGACGTTAAATTGACCCTCGGCGAGAAAACTTACTTTCCGTTCATAGAAAAACCAATTGCCTACGAAGGCCGTGA ATCGGATAATCCGTTGGCCTTCAAGTTCTACGACGCCAACCGACTCATTCTGGGCAAACCGATGAAGGATCTGTTCCGGT TTGCTACGGCTTACTGGCATACCTTCTGCGGTACCGGAGCCGACCCCTTTGGTCCGGGTGTCAAGCATTTTCCCTGGGAT GCCAACCCCGACCCGCTGGCCGCTGCCCATGATAAGATGGATGCCGCTTTCGAGTTTATCACCAAAATAGGCATGGAGTT TTACTGCTTCCACGATGTAGACGTGGCCCCCGAAGGAAACTCTAACAGTGAATTCGAGAAGAACTTCCGGGCTATTGTCG ACTACGCCAAACAGAAGCAGGCCGCCAGTGGTGTAAAACTGCTGTGGGGCACGGCCAACCTGTTCTCGCACGAGCGGTAC ATGAACGGGGCCTCCACCAACCCTGATTTTCACGTGCTCGCCCATGGTGGCTGGCAGGTGAAAAACGCCATCGACGCCAC CATCGAACTCGGGGGCGCAGGCTATACTTTCTGGGGAGGCCGGGAAGGGTACATGTCGCTGCTGAATACCAACATGAAAC GGGAGCAGGAACACCTGGGCAAGTTTCTGCAAATCAGCCGCGATTACGCCCGTAAGCAGGGTTTTAAAGGTTCGTTTTAC ATCGAGCCCAAACCGATGGAGCCCACCAAACACCAGTACGATTTCGATGCAGCAACGGTTGTCGGTTTCCTGAATCGCTT TGGCTTACAGGACGACTTCGAGCTAAACATCGAAACCAACCACGCCACCCTAGCTAATCATACGTTTGCCCACGAATTGC AGATTGCCGCCGATAACAACATGCTCGGCAGCATCGACGCCAACCGGGGCGATTACCAGAATGGCTGGGATACCGACCAG TTTCCGGTAGATGTATACGAACTGACGGAAGCCATGCTGGTCATTCTGGAAGCGGATGGCCTCAAATCCGGCGGGGTTAA CTTCGACGCCAAGACGCGCCGGAATTCAACCGACCTGGACGATATTTTCATCGCCCACATTGGCGGCATGGACACCTTCG CACGGGCAGCCATCGCGGCCGAAGCCATTCTTGATAAGTCGCAGTACCGGAAACTCCGCGCCGAACGTTACGCCAGCTAC GACTCGGGCGAAGGTGCCCGTTTCGAAAAAGGTGAGTTAACGCTGGAAGACCTGCGCCAGTATGCCATGACCAATGGCGA GCCCAAACAACTCAGCGGCAAACAGGAGCTGTATGAAATGATCGTTAATCAGTATATTTAA Protein sequence : MSDVKLTLGEKTYFPFIEKPIAYEGRESDNPLAFKFYDANRLILGKPMKDLFRFATAYWHTFCGTGADPFGPGVKHFPWD ANPDPLAAAHDKMDAAFEFITKIGMEFYCFHDVDVAPEGNSNSEFEKNFRAIVDYAKQKQAASGVKLLWGTANLFSHERY MNGASTNPDFHVLAHGGWQVKNAIDATIELGGAGYTFWGGREGYMSLLNTNMKREQEHLGKFLQISRDYARKQGFKGSFY IEPKPMEPTKHQYDFDAATVVGFLNRFGLQDDFELNIETNHATLANHTFAHELQIAADNNMLGSIDANRGDYQNGWDTDQ FPVDVYELTEAMLVILEADGLKSGGVNFDAKTRRNSTDLDDIFIAHIGGMDTFARAAIAAEAILDKSQYRKLRAERYASY DSGEGARFEKGELTLEDLRQYAMTNGEPKQLSGKQELYEMIVNQYI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-98 | 49 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-98 | 49 |
