|
Name : Slin_3838 (Slin_3838) Accession : YP_003388627.1 Strain : Spirosoma linguale DSM 74 Genome accession: NC_013730 Putative virulence/resistance : Unknown Product : integrase catalytic protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4606191 - 4607009 bp Length : 819 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: yps:pYV0019 transposase DNA sequence : ATGGAAAACTATCGCGTTTCAGCACGTCGTGCATGCGCTGTGATTCAGTTCCGTCGATCCTCCTTGCAGTTTAAATCTCG TCGTCGAGATGACTCCGTGATCCGGAAACGAATCAAAGAAATTGCCCAGGTAAGGGTTCGGTACGGTTATCAGCGGATTT ATGTGCTGCTGCGCCGGGAGGGTTGGCGTGACAACCACAAAAGGGTGTATAGGGTGTATTGTGAAGAAGGATTGCATCTC AGAAGCAAGCGCCCCCGTCGTAATCGAGCCGCTGCCCACCGGTTAGAGCGCCCCCAACTCTCCAGTATTCATCAGTGCTG GAGCATGGATTTTGTGGCTGACCAGCTTTTTGATGGCCGAAAAATCCGGGCGTTAACTATAGTTGATAATTATAGTCGCC AATGCGTGGCCATTCATGTCGGCCAATCGTTGAAAGGGGATGATGTAGTAGCAGTGATGAATCAACTAAAAGAGATACAT TTGGCTATGCCCGAGCGGATTCAAGTAGATAATGGCAGTGAATTTATATCGAAAGCTCTCGATTTGTGGGCTTATGACAA CGGGGTAACATTAGACTTTTCCAGACCTGGCAAGCCAACTGATAACCCGTTTATTGAGTCGTTCAATGGCAGTTTTCGGG ACGAGTGCTTGAACGCTCACTGGTTCTTGTCGTTGGAAGATGCTCGTGAAAAAATCGAGGCTTGGCGTCAAGAATATAAT TCCTTTCGACCCCATAGTTCGCTCGGCGGACGAACACCAGATGAGGCCGGAATGGGTATTGAAAGAAGAACAAATGAACG TCCGGTCCTCAATCTTTGA Protein sequence : MENYRVSARRACAVIQFRRSSLQFKSRRRDDSVIRKRIKEIAQVRVRYGYQRIYVLLRREGWRDNHKRVYRVYCEEGLHL RSKRPRRNRAAAHRLERPQLSSIHQCWSMDFVADQLFDGRKIRALTIVDNYSRQCVAIHVGQSLKGDDVVAVMNQLKEIH LAMPERIQVDNGSEFISKALDLWAYDNGVTLDFSRPGKPTDNPFIESFNGSFRDECLNAHWFLSLEDAREKIEAWRQEYN SFRPHSSLGGRTPDEAGMGIERRTNERPVLNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 4e-57 | 55 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 6e-41 | 48 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 5e-52 | 46 |
