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Name : Slin_3625 (Slin_3625) Accession : YP_003388431.1 Strain : Spirosoma linguale DSM 74 Genome accession: NC_013730 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 4381631 - 4383346 bp Length : 1716 bp Strand : + Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: avn:Avin_08330 sucrose isomerase DNA sequence : ATGAATTACAAAGATGCAGTCATTTATCAAATCTACCCGCGTTCCTTTGCCGATAGTAACGGCGATGGCATTGGGGATTT GCCCGGAATAGCCAGTAAGCTGGATTATCTGGCTGAATTAGGCGTCGATATTTTATGGTTGAGTCCCATTTTCGATTCAC CCAACGCCGACAATGGCTACGATGTTTCCGACTATGAAGCCATCATGCCCGAGTTTGGTACCATGGCCGATTTTGATAAC CTGCTGGCAGGTGTGCATCAGCGCGGTATGCGGCTCATCCTGGATCTGGTTGTCAACCATAGCTCCGACGAGCACCGCTG GTTTCAGGAAAGCCGCAAAAGCAAAGACAATCCATACCGGGACTACTACATCTGGCGCACCCCCAAACTCACGGCCGACG GTCCCGCTGAACCCAACAACTGGCAGTCGATCTTTTCAGGACCGGCCTGGGCGTTCGATGAAACCACGGGCGAGTATTAT CTTCATTTGTTCGCAACTAAACAACCCGACCTCAACTGGGAGCACCCGCCCCTGCGCGAAGCCATTTACAAAATGATGCG TTTCTGGCTCGACAAAGGCGTCGATGGGTTCCGGATGGACGTTATTCCGTTTTTGTCGAAAGACCAGACATTCCCGGATT ACCCGGCGGGTCGTTACGGCGATTCGAGCGTTCATGCCAATGGACCGCGCATTCATGAGTTTTTGCAGGAAATGAATCAT GAGGTCCTCAGCCGGTACGGGCGCGCTGGTGAAGGCTGCGTCAGCATTGGCGAGGGTATTGGCGTTACGGCCGAACTGGC AAACCTGTATGTGGGTAAAGACCGGCATGAACTGAACATGATCTATCATTTCGACCATGCCGTACCCCGTGAAGAATACC GGTTCGTTGACCCGGCCCCCGAGTTCACCGTACTTGAGTTGAAAGCCATCTTTGCCAAATGGAATCTCGCTCTCGACAGC ATCGACCCCGCAACCCAGGCCACGGGCGGCTGGCAAAATATTTACTTTGGGAATCACGATAATCCCCGATGCATCTCCCG CTTTGGTGATCCGGAACGCTACCCGTACGAATCAGCAACCATGCTGGCAACGGTTCTGCTTACCCAACGGGGTACACCCA ATATTTATCAGGGCGACGAAATTGGTATGACCAACTGCGCGTTCGACACCATTGACGAGTACAACGACATTCAGGTAAAA AATGCCTGGCAGGCGTTGATCACCCAGGGGGAGCATTCGCCCGAGGTGTTTCTGGCAACGGCCAACCAGATCGCCCGCGA CCACGCTCGTACACCTATGCAATGGAGCGATGCCCCGAATGCAGGGTTCACGACGGGGCAGCCGTGGCTTAAAATAAACC ATAACTATCAAACAATTAATGTAAGCCAGCAGGAAGCGACTCCCCGTTCGGTACTGCATTATTACCAGAAACTACTTCGC TGGCGAAAGCAGACACTGGCTATTCATGAGGGAACGTATAGCGATTTGCTACCCGATCACCCATCTCTTTGGGTATTTGA ACGTACGCTAAACAATGTTACTTTTTACACAGTTGCTAACTTCTCGGGAGACTTTGTAGTGATACCGGTCATACAGGGCG TTTCGCTTTCAGATAACCAGCTGGTTTTAGCCAATCTGCCGAACCAAACCGATACGTTACAACCGTTCGAAGCCCGTATT TATGAACGAAAAAAGACTGGTATAAGCGATGAATAA Protein sequence : MNYKDAVIYQIYPRSFADSNGDGIGDLPGIASKLDYLAELGVDILWLSPIFDSPNADNGYDVSDYEAIMPEFGTMADFDN LLAGVHQRGMRLILDLVVNHSSDEHRWFQESRKSKDNPYRDYYIWRTPKLTADGPAEPNNWQSIFSGPAWAFDETTGEYY LHLFATKQPDLNWEHPPLREAIYKMMRFWLDKGVDGFRMDVIPFLSKDQTFPDYPAGRYGDSSVHANGPRIHEFLQEMNH EVLSRYGRAGEGCVSIGEGIGVTAELANLYVGKDRHELNMIYHFDHAVPREEYRFVDPAPEFTVLELKAIFAKWNLALDS IDPATQATGGWQNIYFGNHDNPRCISRFGDPERYPYESATMLATVLLTQRGTPNIYQGDEIGMTNCAFDTIDEYNDIQVK NAWQALITQGEHSPEVFLATANQIARDHARTPMQWSDAPNAGFTTGQPWLKINHNYQTINVSQQEATPRSVLHYYQKLLR WRKQTLAIHEGTYSDLLPDHPSLWVFERTLNNVTFYTVANFSGDFVVIPVIQGVSLSDNQLVLANLPNQTDTLQPFEARI YERKKTGISDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-120 | 47 |
