Gene Information

Name : Slin_3048 (Slin_3048)
Accession : YP_003387858.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Resistance
Product : rifampin ADP-ribosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3702248 - 3702700 bp
Length : 453 bp
Strand : -
Note : KEGG: rpa:RPA2900 rifampin ADP-ribosyl transferase

DNA sequence : 
ATGAAAATGGAAAACGATAACCGAGAGAACAAATCGAATGGCCGAAGTGCAACTCCTTTTCTTCAGACGTTCTTCCACGG
CACGAAGGCTAATCTACAAATTGGCGATCTTATCGAAGTTGGGTTTAACTCAAACTTCGGGCAAAGAAAAAACGCAAAAT
ATATTTTCCTGACAGCAACGCTCGACGCTGCTATATGGGGAGCTGAACTCGCCTTCGGGGAAGGGCGGGAACGAATTTAT
TTAGTAGAAGCAACCGGGCCAATTGAGGACGACCCTGATCTGACCGACAAAAAATTTCCGGGTAATCCAACAAAATCGTA
TCGGTCGGTAGATCCATTCAAGGTGGTTGGCGAAATCGCTATCTGGCAGGGCCACTCACCCGAACAGGTCAACGCCATGA
AAGACGGTTTAGCCAGACTTAAAGAACAAGGTATTAATTCATTGAACGACTAA

Protein sequence : 
MKMENDNRENKSNGRSATPFLQTFFHGTKANLQIGDLIEVGFNSNFGQRKNAKYIFLTATLDAAIWGAELAFGEGRERIY
LVEATGPIEDDPDLTDKKFPGNPTKSYRSVDPFKVVGEIAIWQGHSPEQVNAMKDGLARLKEQGINSLND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arr-2 CAJ77045.1 Rifampin ADP-ribosylating transferase Not tested AbaR1 Protein 2e-31 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slin_3048 YP_003387858.1 rifampin ADP-ribosyl transferase AF001493.1.orf0.gene Protein 4e-34 55
Slin_3048 YP_003387858.1 rifampin ADP-ribosyl transferase NC_010410.6003052.p0 Protein 1e-31 51
Slin_3048 YP_003387858.1 rifampin ADP-ribosyl transferase FM897214.1.orf2.gene Protein 2e-31 50
Slin_3048 YP_003387858.1 rifampin ADP-ribosyl transferase AL939114.1.orf1.gene Protein 7e-21 48