Gene Information

Name : Slin_2998 (Slin_2998)
Accession : YP_003387808.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : Na+ dependent nucleoside transporter domain-containing protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 3629514 - 3630755 bp
Length : 1242 bp
Strand : +
Note : PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: hap:HAPS_1220 transporter nucleoside permease

DNA sequence :
ATGGAGCGTTTTACCGGCCTACTAGGCATTGTTTTAATTCTGGGTATTGCTTATGCCCTTTCTGATAATCGTAAAGCCAT
TAATTATCGTACTGTTGGGGTAGGGCTTGCGCTTCAATTTGGTCTGGCTGTTTTCGTCTTAAAAACGGACGTTGGACAGC
GTCTCTTTCAGGGTCTTGGCTATTATGTTGATCGATTGCTTCAAAAAGCCAATATTGGTGCCGAGTTCGTTTTCTCCTCT
TTGGTGAGACCGGATATACTTACAAGAGCTTTTGGCCCCGAGAACAGCTTTATTTTCTTCTTCAAGGTTGTTCCAACCAT
CATTTTTGTAGCCGTTTTGGTCAACATTTTTTATCACCTTGGCATCATGCAGCGCATCGTGGCGGTGATGGCCAAAGCCA
TGAAATGGTTGATGGGCGTGAGTGGAGCCGAAGCGTTGTCCAACGTTGCCAGTACATTTGTTGGGCAGGTAGAAGCGCAG
ATCATGATTAAGCCGTACCTCAATGGCATGACCAATTCTGAACTACTCGCCAGCATGACCGGTTCGTTTGCTTGTATAGC
CGGGGGTGTACTAGCGGTTTACATTTCTTTGGGCGTGCCTGCCCCTTACCTACTGGCGGCCAGCATTATGGCTGCACCGG
GGGCGTTGGTAATTAGCAAGATTGTAATGCCGGAAACGCAGGTATCAGAAACCCAGGGAACGGTTAAAGTTGAAATCAAA
AAAATCTACGCGAACCTGCTCGATGCCATTGCCGCTGGTGCTAGCGAAGGGCTTAAAGTAGGGTTTAATGTAGTGGCCAT
GCTGATCGGTTTTATCGCTCTGATCGCACTGATCGATAGCCTGATGTTTCGCATAGGTTTCTACATTTTCAACGTCGATT
TTCTGAGCCTTAACTACCTGCTTGGCAAACTTTTCTCTCTGTTTGCCTGGGCAATGGGCGTACCAGCGAAAGACATCGAA
GCCGCTGGTGCCCTGATGGGGACGAAAATGGTGGTTAATGAATTTGTTGCGTATCTGGACTTAGTGAAGATAAAGCAGAC
GCTTGACCCTAAAACAATCGCTATCGTCAGCTTTGCTCTGTGTGGCTTTGCCAACTTTAGTTCGATTGCCATTCAGGTCG
GGGGCATTGGCGAACTAGCGCCAAAACGCCGGAGCGATCTGGCGCGCATTGGCTTCAAAGCACTTATTTGCGGTACGCTG
GCAAGTTATATGTCGGCTACCATCGCTGGATTGCTTTTGTAG

Protein sequence :
MERFTGLLGIVLILGIAYALSDNRKAINYRTVGVGLALQFGLAVFVLKTDVGQRLFQGLGYYVDRLLQKANIGAEFVFSS
LVRPDILTRAFGPENSFIFFFKVVPTIIFVAVLVNIFYHLGIMQRIVAVMAKAMKWLMGVSGAEALSNVASTFVGQVEAQ
IMIKPYLNGMTNSELLASMTGSFACIAGGVLAVYISLGVPAPYLLAASIMAAPGALVISKIVMPETQVSETQGTVKVEIK
KIYANLLDAIAAGASEGLKVGFNVVAMLIGFIALIALIDSLMFRIGFYIFNVDFLSLNYLLGKLFSLFAWAMGVPAKDIE
AAGALMGTKMVVNEFVAYLDLVKIKQTLDPKTIAIVSFALCGFANFSSIAIQVGGIGELAPKRRSDLARIGFKALICGTL
ASYMSATIAGLLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 4e-63 41