Gene Information

Name : Slin_2900 (Slin_2900)
Accession : YP_003387712.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 3503352 - 3505004 bp
Length : 1653 bp
Strand : +
Note : PFAM: catalase related subgroup; catalase domain protein; KEGG: mch:Mchl_3534 catalase

DNA sequence :
ATGGAAACGAACCAAAACGGTAATGGTCAAAACGGGCATACACCCGGACCAGAATTCGGTGCCACCGGACTTCAGCCACA
AGACCAGCCCACTGACCAGACCTTAACGACCAGGCAGGGTCACCCGCTTACCAACAACCAGAATGTTCGCACAGTGGGTA
ATCGTGGGCCAACCACGCTGGAAAACTACCCTTTCCTCGAAAAAATAAGTCATTTCGACCGCGAGCGCATCCCAGAACGC
GTTGTTCACGCCCGTGGGGCCGGTACACACGGCGTTTTCGAAGCCTACGGAACCGTTGGCGACGAGCCTGTTTCGAAATA
CACCCGTGCCAAATTGTTTCAGGAGAAAGGAAAGCAAACGCCGGTTTTCGTACGTTTCTCATCCGTTATTCACGGTGGTC
ATTCGCCCGAAACCCTCCGCGACCCACGTGGTTTTGCCGTGAAATTTTACACCGAAGAGGGTAACTGGGATCTGGTTGGC
AACAACCTGAAAGTGTTCTTTATTCGCGATGCGATGAAGTTCCCCGACATGGTACACGCTCTGAAGCCAGACCCAATAAC
AAACCGGCAGGACGGCGGACGTATTTTCGATTTTATGAGCAATACGCCCGAGTCGGTCCATATGCTCACCTTCTTATTTT
CACCCTGGGGTATTCCGGCCAACTACCGGCAGATGCAGGGCTCAGGTGTGAACACCTACAAATGGGTGAATGAACAGGGT
GAAGGCGTACTGATCAAGTACCACTGGGAACCTAAACAGGGAATCAAGAATCTGACCCAGCCCGAAGCCGAGCAGATTCA
GGGTAAAAACTTTAACCATGCTACCCAGGATTTGTATGACGCCATTGAAGCCGGAAATTTCCCCCAATGGGAGCTTCTGG
TTCAGATTATGAGCGACGACGAGCACCCTGAACTTGACTTCGATCCGCTCGATGATACAAAGCTGTGGCCGCAGGAGCAG
TTTCCGTGGTTGCCGGTGGGGATGATGACGCTCAACAAAAACCCGGAGAATTATTTCCACGAGGTAGAGCAGGTTGCTTT
TGGAACAGGGGTGCTGGTCGATGGGCTGGACTTCTCCGACGACAAAATGCTTCAGGGCCGTACCTTCTCCTATTCAGATA
CGCAGCGTTACCGTGTGGGTACCAATTACCTGCAACTGCCCATCAATGCCCCGAAAAAACATGTGGCAACAAACCAGCGC
GACGGCCAGATGCAATACCGCGTTGACACCGCACCGGGGCAGAATAAGCACGTCAATTACGAGCCGTCGTCCATGAACGG
CCTGAAAGAAGCGCCCCGGACGTATCCCGATCATAAGCCTTACATTTCGGGAAACCTAATGCGCCAGCCAATTGACCGGA
CCAATAACTTCAAACAGGCGGGAGAACGTTACCGTACATTTGAGGACTGGGAACGCGATGATCTGATCAATAATCTGGTT
GCCAATCTATCGGGCGCTCAGCAAAATGTTCAGGATAAAATGGTTGAACTGTTCAGTCAGTGCGACGAGGATTATGGTCG
GCGCGTGAAGGAAGGCCTGCAAAAAGTAGCAAACGGCACAGGCGAGCAACTACACGGCCAGGCAAATACCCAGGTTGGGC
AGGAAGCTGCGCAACAGGCCGAGGAATTGGCCCACGAAGCCAAACCCTATTAA

Protein sequence :
METNQNGNGQNGHTPGPEFGATGLQPQDQPTDQTLTTRQGHPLTNNQNVRTVGNRGPTTLENYPFLEKISHFDRERIPER
VVHARGAGTHGVFEAYGTVGDEPVSKYTRAKLFQEKGKQTPVFVRFSSVIHGGHSPETLRDPRGFAVKFYTEEGNWDLVG
NNLKVFFIRDAMKFPDMVHALKPDPITNRQDGGRIFDFMSNTPESVHMLTFLFSPWGIPANYRQMQGSGVNTYKWVNEQG
EGVLIKYHWEPKQGIKNLTQPEAEQIQGKNFNHATQDLYDAIEAGNFPQWELLVQIMSDDEHPELDFDPLDDTKLWPQEQ
FPWLPVGMMTLNKNPENYFHEVEQVAFGTGVLVDGLDFSDDKMLQGRTFSYSDTQRYRVGTNYLQLPINAPKKHVATNQR
DGQMQYRVDTAPGQNKHVNYEPSSMNGLKEAPRTYPDHKPYISGNLMRQPIDRTNNFKQAGERYRTFEDWERDDLINNLV
ANLSGAQQNVQDKMVELFSQCDEDYGRRVKEGLQKVANGTGEQLHGQANTQVGQEAAQQAEELAHEAKPY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-89 42