Gene Information

Name : Slin_2800 (Slin_2800)
Accession : YP_003387614.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 3388643 - 3389401 bp
Length : 759 bp
Strand : -
Note : KEGG: dvl:Dvul_0267 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence : 
ATGATTATCGGAATAATCCCCGCCCGCTACGGCTCCTCCCGTTTTCCCGGCAAACCCCTGGCCGACATTAGGGGAAAATC
CATGATTCAGCGGGTGCTCGAACAGGCGAATCAGGCCGAGTCGCTGGCAAAAGTAGTGGTAGCAACGGACGACGACCGCA
TTGCCGAAGCCGTTCGCCGACTTGGTTACGAAGCCGTTATGACCCGCGTTGATCACCCCAGCGGTACCGACAGGTGTTGG
GAAGCTTACGACCGACTGGTGGCAGACGGTGTGATTGTCGGCAATTCGACTGATTACGTACTGAATATTCAGGGGGATGA
GCCCTTTCTGGACCCGGCTCAGATTGACGAACTGGCCGCTATTCTGGACGGTTCCGTCGAACTGGCTACGCAGATGGCAA
CCGTCGATTCGGCGGAGATGCTGCATGACCCCAAGGAGGCTAAAATTGTTATCAACAGCCAGAACGAAGCCTTGTATTTT
AGTCGTTCGGCGGTGCCTTATCTGTGGGGCGTTGAACCAGACCAGTGGCACGCAAAGCACGCATATCACCGCCATGTGGG
CTTGTATGCCTACCGCGTGGATGTACTGGAAAGGTTAACTCAGTTGCCTCCGTCGCCCCTCGAACGGGCGGAGTCGCTGG
AGCAGTTGCGCTGGCTGGAAGCGGGGTATCGAATCAAACTGGTTCCCACAAACTTTCAGACGCCAAGCGTCGATAGCCCG
GAGGATATTGAGAAGATTCTGAAAAGCGGAGTGGCGTAG

Protein sequence : 
MIIGIIPARYGSSRFPGKPLADIRGKSMIQRVLEQANQAESLAKVVVATDDDRIAEAVRRLGYEAVMTRVDHPSGTDRCW
EAYDRLVADGVIVGNSTDYVLNIQGDEPFLDPAQIDELAAILDGSVELATQMATVDSAEMLHDPKEAKIVINSQNEALYF
SRSAVPYLWGVEPDQWHAKHAYHRHVGLYAYRVDVLERLTQLPPSPLERAESLEQLRWLEAGYRIKLVPTNFQTPSVDSP
EDIEKILKSGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 6e-37 47
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 7e-37 47
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 5e-37 47