Gene Information

Name : Slin_2350 (Slin_2350)
Accession : YP_003387170.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2829953 - 2830615 bp
Length : 663 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cps:CPS_4701 ABC transporter ATP-binding protein

DNA sequence : 
ATGATACACCTCCAGAACATCGAAAAAGTTTACCGGACCAGCACCATCGAAACGCTGGCGCTAAACAACATCAACCTCGA
CATTAAAAAAGGGGAGTTCGTCTCCATCATGGGGCCCTCGGGTTGTGGCAAGAGTACCCTGCTCAACGTCATGGGGTTGC
TCGACGAACCCTCAAAGGGAACCGTGCAGCTCGACGGCCAGCCGGTCACCAAATACACCGACAAAGAACTGGCTAAACTG
CGTAATCAGAAGATCGGCTTCATCTTCCAGAGCTTTCACCTCATCAACGACCTGACGGTGCTCGATAACGTCGAGATTCC
ACTGCTCTATCGGTCAACGAACGGGAAACCCCGGCAGGAGTACGCCAAAGAAGCCCTCGCCAAAGTGGGCCTGAGTAACC
GCATGAAACACTTCCCGAAGCAGCTTTCGGGCGGACAGAAGCAGCGTGTCGCCATCGCCCGTGCCATTGTTGGCAACCCG
GATATTATCCTGGCCGATGAGCCCACCGGCAACCTCGACAGCGCCATGGGCAACGAAATAATGACTATCCTCCAGGACCT
CAACAATGAGGGTGCCACCATCGTAATGGTCACGCACGATGAACAAATGGCTAAACGCACCCACCGCCTTATCCGGCTAT
TTGACGGCACGCAGGTTTTATAA

Protein sequence : 
MIHLQNIEKVYRTSTIETLALNNINLDIKKGEFVSIMGPSGCGKSTLLNVMGLLDEPSKGTVQLDGQPVTKYTDKELAKL
RNQKIGFIFQSFHLINDLTVLDNVEIPLLYRSTNGKPRQEYAKEALAKVGLSNRMKHFPKQLSGGQKQRVAIARAIVGNP
DIILADEPTGNLDSAMGNEIMTILQDLNNEGATIVMVTHDEQMAKRTHRLIRLFDGTQVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-38 46
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slin_2350 YP_003387170.1 ABC transporter NC_012469.1.7686878. Protein 1e-53 55
Slin_2350 YP_003387170.1 ABC transporter NC_008702.1.4606598. Protein 3e-42 48
Slin_2350 YP_003387170.1 ABC transporter CP001581.1.gene798.p Protein 3e-39 44
Slin_2350 YP_003387170.1 ABC transporter CP001581.1.gene598.p Protein 2e-35 43
Slin_2350 YP_003387170.1 ABC transporter NC_012469.1.7686946. Protein 1e-28 41