Gene Information

Name : Slin_2286 (Slin_2286)
Accession : YP_003387106.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : integrase catalytic protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2766355 - 2767173 bp
Length : 819 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: yps:pYV0019 transposase

DNA sequence :
ATGGAAAACTATCGCGTTTCAGCACGTCGTGCATGCGCTGTGATTCAGTTCCGTCGATCCTCCTTGCAGTTTAAATCTCG
TCGTCGAGATGACTCCGTGATCCGGAAACGAATCAAAGAAATTGCCCAGGTAAGGGTTCGGTACGGTTATCAGCGGATTT
ATGTGCTGCTGCGCCGGGAGGGTTGGCGTGACAACCACAAAAGGGTGTATAGGGTGTATTGTGAAGAAGGATTGCATCTC
AGAAGCAAGCGCCCCCGTCGTAATCGAGCCGCTGCCCACCGGTTAGAGCGCCCCCAACTCTCCAGTATTCATCAGTGCTG
GAGCATGGATTTTGTGGCTGACCAGCTTTTTGATGGCCGAAAAATCCGGGCGTTAACTATAGTTGATAATTATAGTCGCC
AATGCGTGGCCATTCATGTCGGCCAATCGTTGAAAGGGGATGATGTAGTAGCAGTGATGAATCAACTAAAAGAGATACAT
TTGGCTATGCCCGAGCGGATTCAAGTAGATAATGGCAGTGAATTTATATCGAAAGCTCTCGATTTGTGGGCTTATGACAA
CGGGGTAACATTAGACTTTTCCAGACCTGGCAAGCCAACTGATAACCCGTTTATTGAGTCGTTCAATGGCAGTTTTCGGG
ACGAGTGCTTGAACGCTCACTGGTTCTTGTCGTTGGAAGATGCTCGTGAAAAAATCGAGGCTTGGCGTCAAGAATATAAT
TCCTTTCGACCCCATAGTTCGCTCGGCGGACGAACACCAGATGAGGCCGGAATGGGTATTGAAAGAAGAACAAATGAACG
TCCGGTCCTCAATCTTTGA

Protein sequence :
MENYRVSARRACAVIQFRRSSLQFKSRRRDDSVIRKRIKEIAQVRVRYGYQRIYVLLRREGWRDNHKRVYRVYCEEGLHL
RSKRPRRNRAAAHRLERPQLSSIHQCWSMDFVADQLFDGRKIRALTIVDNYSRQCVAIHVGQSLKGDDVVAVMNQLKEIH
LAMPERIQVDNGSEFISKALDLWAYDNGVTLDFSRPGKPTDNPFIESFNGSFRDECLNAHWFLSLEDAREKIEAWRQEYN
SFRPHSSLGGRTPDEAGMGIERRTNERPVLNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-57 55
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 6e-41 48
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-52 46