Gene Information

Name : Slin_2186 (Slin_2186)
Accession : YP_003387009.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 2653582 - 2654328 bp
Length : 747 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rle:pRL120546 short-chain dehydrogenase/oxidoreductase

DNA sequence :
ATGGAAAATAACATTAACGGAAAAGTGATCGTCATTACCGGCGCCAGCAGTGGTCTGGGCGAAGCGGCAGCCAGGCACTT
GTCAGCGCTTGGGGCAACGGTTGTACTGGGTGCCAGAAGAGCCGACCGAATTGACGAGCTGGCCAAGGAGATTCAGGACC
AGGGTGGAAAAGCACTGGCCATGGCGACGGATGTAACCCAGCGGGATCAAGTAAAGAATCTAGTCGATGCAGCGGTTGAC
CAATTTGGGCGGGTAGACGTGATCCTGAATAATGCCGGTATCATGCCCTTATCGCCGATGGACCGCCTGAATGTGGCCGA
GTGGGATACGATGATCGATGTGAACATTAAAGGGGTGCTTAACGGTATTGCTGCCGTTCTCCCTTACATGAAAGAACAGA
AGTCAGGTCAAATCATCAACACCTCTTCGGTGGCGGGTCATAAAGTGTTTACCGGCTCTGCGGTCTATTCGGCTACCAAA
TATGCGGTGCGTGCCTTGACAGAAGGCTTACGGATGGAGGTGAAGCCGTACAATATCCGGACAACCATTGTTTGTCCCGG
CGCGGTTCAAACAGAATTGCTGGAGCATATTACTGAAGCCGATATTCAACAAGCCAATAAAGAGTATGTAGGAGCGGTAG
GGATTAGTCCGGACAGTTTTGCCCGTGTGGTGGCATTTGCCATCAGTCAGCCGGAGGATGTAGACATCAATGAAGTCATC
TTCCGTCCGACATCCCAGGAACTCTAG

Protein sequence :
MENNINGKVIVITGASSGLGEAAARHLSALGATVVLGARRADRIDELAKEIQDQGGKALAMATDVTQRDQVKNLVDAAVD
QFGRVDVILNNAGIMPLSPMDRLNVAEWDTMIDVNIKGVLNGIAAVLPYMKEQKSGQIINTSSVAGHKVFTGSAVYSATK
YAVRALTEGLRMEVKPYNIRTTIVCPGAVQTELLEHITEADIQQANKEYVGAVGISPDSFARVVAFAISQPEDVDINEVI
FRPTSQEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 6e-54 53
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 9e-50 51