Gene Information

Name : Slin_1914 (Slin_1914)
Accession : YP_003386758.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : class I and II aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 2318587 - 2319798 bp
Length : 1212 bp
Strand : +
Note : PFAM: aminotransferase class I and II; KEGG: pfs:PFLU1731 aminotransferase

DNA sequence :
ATGGAAATACTTAAAAGTGATCGGTTAACACACCTCAAATACGACATTCGGGGCCCGATTTATGAAAAATCCCTCGAACT
TGAGAGTCAGGGTTACAAAATTATCAGCCTTAATATTGGCAATCCGGCCACGTTCGGTTTCGACGCGCCCGACGAAATTG
TCCATGACATTATTCTCAATATCCGTAATGCGCAGGGCTATTCCGACTCAAGGGGGCTTTTTGCGGCACGTAAAGCCGTT
ATGCACCATACGCAGAATATTGGCTTGCCCGGTATTGCCATCAACGACATCTATATTGGCAATGGTGTAAGCGAACTGAT
TATGCTGTCGATGCAGGCGCTTCTCAATGAGGGAGACGAAGTGCTGGTGCCCTCACCCGACTACCCACTCTGGACAGCTT
CGGTAGCTTTCTGTGGCGGTAAACCGGTTCATTACATTTGCGACGAAGCGGCCGACTGGAATCCAGACCTGGCTGATCTG
GAGCGAAAAATTACTCCCCGTACACGCGCCATCGTTGTCATAAACCCGAACAACCCGACGGGGGCCGTGTACGAAAAATC
GGTACTGGAAGGTATTGCCAGAATTGCCGAGAAACATAAACTCATCGTCTTTTCGGATGAGATTTATGACCGTATTCTGT
ATGATGAAGCCATTCATTACCCGATTTCCAAAATGATACACGAAACGCTCTGTATCACGATGGGGGGCTTATCAAAAAAC
TACCGGGCGGCCGGTTTCCGGGGTGGCTGGATGATCCTAAGCGGGGCACGGCACCGGGCTAAATCGTACATTGAGGGGTT
AACATTACTGGCCAGTATGCGCCTTTGTGCCAATGTACCCACGCAGTTTGCCATTCAAACGGCCTTGGGCGGGTACCAGA
GTATCAATGATCTGGTAATGCCAACCGGGCGTCTGCATAAGCAAATGATGATGGCTTATGACCGTATGACCGCTATTCCG
GGTATCAGCTGCGTAAAGCCCAAAGGAGCTTTGTACATTTTTCCAAAGATTGATTTAACCCAGTTTGACCTGATCGACGA
TAACGACTTCGTGCTGAACCTGCTCATTGAACAGAAAGTGCTGGTTGTGGCGGGAAATGGCTTTAACTACAGTCAAAACG
ACCATTTTCGTATCGTTTGCTTGCCAACTCTCGATGAGTTGACCGTAGCTATGGATCGTATTGAGCACTTCCTTGAAAGT
CGCCGGAAATAA

Protein sequence :
MEILKSDRLTHLKYDIRGPIYEKSLELESQGYKIISLNIGNPATFGFDAPDEIVHDIILNIRNAQGYSDSRGLFAARKAV
MHHTQNIGLPGIAINDIYIGNGVSELIMLSMQALLNEGDEVLVPSPDYPLWTASVAFCGGKPVHYICDEAADWNPDLADL
ERKITPRTRAIVVINPNNPTGAVYEKSVLEGIARIAEKHKLIVFSDEIYDRILYDEAIHYPISKMIHETLCITMGGLSKN
YRAAGFRGGWMILSGARHRAKSYIEGLTLLASMRLCANVPTQFAIQTALGGYQSINDLVMPTGRLHKQMMMAYDRMTAIP
GISCVKPKGALYIFPKIDLTQFDLIDDNDFVLNLLIEQKVLVVAGNGFNYSQNDHFRIVCLPTLDELTVAMDRIEHFLES
RRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-113 54
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-113 54
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-113 54
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-113 54