Gene Information

Name : Slin_1628 (Slin_1628)
Accession : YP_003386474.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : heat shock protein HslVU, ATPase HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 1960064 - 1961449 bp
Length : 1386 bp
Strand : -
Note : KEGG: sfu:Sfum_0065 ATP-dependent protease ATP- binding subunit; TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA-2 domain protein; ATPase AAA; SMART: ATPase AAA

DNA sequence :
ATGACTGAATTACTTAAAGACCTAACACCCCGGCAGATTGTTGCCGAACTAGACCAGTATATTATTGGCCAGCACGATGC
CAAACGCAACGTGGCCATTGCCCTTCGAAACCGCTGGCGTCGTATGAACAGCGCTGCCGATATGCAGCGCGAAATAACGC
CTAACAATATTCTGATGATTGGTGCTACGGGCGTCGGGAAAACCGAAATTGCCCGCCGACTCGCCAAAATAGCCGATGCG
CCGTTTATAAAAGTTGAAGCTTCCAAATTCACCGAAGTGGGCTATGTGGGCCGCGATGTGGAAAGCATGGTCCGCGACCT
GGTTGAGCAGGCCGTGAATATGGTGCGGGCCGCTAAAAAAGAAGCCGTTCAGGTGAAAGCTCAGCAGATGGTTGAAGATG
TCATTCTGGATATTCTGATACCACCCGTTAAGCCCACTAACGGGCATATGGGTTTTGAGAACGAGAAAAAAGATGCCGAC
GCCGAGCTAAACGAGCGCACTCGCGAGCGGTTCCGGGAAAAAATTCGCTCCGGCGAGATGGACGACCGCAAAATCGACAT
CGACGTTCAGCAGGCCCAGACACCTAACATTGGTATTATGGGTGGCGCCATTGACGACATGTCGATGATGAACATTCAGG
AGATGATTGGCGGCATGATGCCTAAACGGGGCAAAAAGCGTAAGGTGAGCATCGCCGAAGCCCGCAAAATCCTGCTGGAA
GAAGAAGCCGCCAAGCTCATCGACATGGACGAGGTGAAGGAAGAAGCCATCCGTAAAGCCGAAGACGCGGGTATTATTTT
CATCGACGAAATCGATAAAGTGGCTTCTGCCCGTTCGGGCAATGGCGGTGGCGGCCCCGACGTAAGCCGGGAGGGTGTGC
AGCGGGATTTATTGCCGATTGTGGAAGGCAGCGCCGTAAATACCAAATACGGCGTCATTCATACCGACCACATCCTGTTC
GTAGCCGCCGGTGCCTTTCACGTCGCCAAACCCAGCGATCTGATTCCCGAGTTGCAGGGACGTTTCCCGATTCGGGTGGA
GTTGCAGAGCCTGTCGGAAGATGACTTTTACCAGATACTGAAAGAGCCCAAAAACGCCCTGACGAAACAATACGTAGCCA
TGTTAAAGGCCGAAAGCGTTGACCTGACCTTTCAGGATGATGCCCTGCGCGAACTAGCCCGGATTGCCTTCGAGGTGAAC
AGCGACGTGGAAAATATAGGTGCCCGCCGACTACAAACGGTACTTAGCCACTTGATGAACGACTTTATGTTCGACATTCC
CGATGTTATTGGTGCCAACGCTCACGTGGTTGTTACCAAAGAACTGGTAAATGAAAAACTGAATGGGCTGGTGAAGAACC
GGGATTTGAGCCAGTTTATCCTGTAG

Protein sequence :
MTELLKDLTPRQIVAELDQYIIGQHDAKRNVAIALRNRWRRMNSAADMQREITPNNILMIGATGVGKTEIARRLAKIADA
PFIKVEASKFTEVGYVGRDVESMVRDLVEQAVNMVRAAKKEAVQVKAQQMVEDVILDILIPPVKPTNGHMGFENEKKDAD
AELNERTRERFREKIRSGEMDDRKIDIDVQQAQTPNIGIMGGAIDDMSMMNIQEMIGGMMPKRGKKRKVSIAEARKILLE
EEAAKLIDMDEVKEEAIRKAEDAGIIFIDEIDKVASARSGNGGGGPDVSREGVQRDLLPIVEGSAVNTKYGVIHTDHILF
VAAGAFHVAKPSDLIPELQGRFPIRVELQSLSEDDFYQILKEPKNALTKQYVAMLKAESVDLTFQDDALRELARIAFEVN
SDVENIGARRLQTVLSHLMNDFMFDIPDVIGANAHVVVTKELVNEKLNGLVKNRDLSQFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 1e-97 50