|
Name : Slin_1435 (Slin_1435) Accession : YP_003386284.1 Strain : Spirosoma linguale DSM 74 Genome accession: NC_013730 Putative virulence/resistance : Unknown Product : pyridine nucleotide-disulfide oxidoreductase dimerisation subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1749075 - 1750433 bp Length : 1359 bp Strand : + Note : PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: xau:Xaut_2904 pyridine nucleotide-disulphide oxidoreductase dimerisation region DNA sequence : ATGGGTATGCTTACTTTTGACCTGATTGTTATCGGCACCGGCTCGGCGGGTGCTACGGTTGCTCAAACTGCCCGTAAGGC CGGTAAATCGGTGGCTATAATTGACAAACTACCCTTTGGCGGAACCTGCTCGCAACGGGGCTGCGATCCTAAAAAAATAC TGGTAGGGGCAGCCGAAATTGTGGCCCGCTCGGAACAACTGACCGGTAAAGGCATTACCTCCCCCGCCACAATCGACTGG GACGCCTTGATGCAGTTCAAAAAGACGTTTACCAGCCCGATTCCGGAGCGAACACAATCGAAATTTACTGACCAGGGTAT TCAGATCTTTCAAGGAATTGCTTCGTTTTCGTCAGCCAACACCATTCGGATTGGCGAAGTAGAGCTTACGGCTAATCATA TTGTTGTCGCAACGGGGCAGCGGCCCCAACCGCTTAATATTCCCGGAGAGAAGTTATTGATCGACAGTACTGGGTTTCTG GAGCTTCCCCGGCTTCCGGCCAAAATTGTTATGGTAGGCGGTGGCTACATCGCTTTTGAATTTGCTCATATTGCTGCCCG CGCGGGAGCAAAGGTCAGCATTATTCATCAGGGCCAACGCCCGCTGGAGGGCTTTGATGCCGATCTGGTAGCCTTGCTTG TGAAAGCGATGAATGCCATTGGTATTCACATAATACTGGACGCCAGGGTAACAGCACTGGAGGGCGATCGGGATGAGCTG ATCGTTCGGTATTCACAGCATGACAAAGAGCATACAGTTTCCACGAACCTGGTCGTCCATGCTGCCGGACGTGTAGCCGA TGTGGCTGAGCTTGATCTGGGAAATGCCGGTGTTACGGTTGGGAAAAAAGGGATAGTCGTCAACGAATACCTGCAAAGCG TGTCAAACCCGGGTATCTATGCCTGTGGGGATGTCGCTGAGAAAGGTCTACCCTTAACGCCCCTGGCTTCGTATGAAGGA AGCATTGTTGCCGAGAACATTCTGAACGGTAATAACCGGATGTATGAAGATAACCCTGTGCCAACGGCTGTTTTTACGAT CCCGACGTTAGCTTCCGTTGGCCTGACAGAAGAACAGGCGAAAGACAAAGGACTTAGGGTACAAGTAAGATGTCAGGAAA CGAATGATTGGTACAGCAGCCGACGTATCAATGAGTCGTTCACTGCGTTTAAAACGCTGGTGGAGGCAGAAACGGGTACG ATTGTAGGAGCACACGTACTGGGATCAGGTTCTGAAGAATTGATCAACCTATTTACACTTGCCATCCGGCATCGAATTAA CGCCAAGGATTTAGGGGCCATGCTTTTTGCTTATCCTACACACGGCTCTGACCTGAGTTCGATGTTGCCTGACCATTGA Protein sequence : MGMLTFDLIVIGTGSAGATVAQTARKAGKSVAIIDKLPFGGTCSQRGCDPKKILVGAAEIVARSEQLTGKGITSPATIDW DALMQFKKTFTSPIPERTQSKFTDQGIQIFQGIASFSSANTIRIGEVELTANHIVVATGQRPQPLNIPGEKLLIDSTGFL ELPRLPAKIVMVGGGYIAFEFAHIAARAGAKVSIIHQGQRPLEGFDADLVALLVKAMNAIGIHIILDARVTALEGDRDEL IVRYSQHDKEHTVSTNLVVHAAGRVADVAELDLGNAGVTVGKKGIVVNEYLQSVSNPGIYACGDVAEKGLPLTPLASYEG SIVAENILNGNNRMYEDNPVPTAVFTIPTLASVGLTEEQAKDKGLRVQVRCQETNDWYSSRRINESFTAFKTLVEAETGT IVGAHVLGSGSEELINLFTLAIRHRINAKDLGAMLFAYPTHGSDLSSMLPDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 2e-106 | 47 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 3e-106 | 47 |
