Gene Information

Name : Slin_0125 (Slin_0125)
Accession : YP_003384996.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 150495 - 150761 bp
Length : 267 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: glo:Glov_1433 transposase IS3/IS911 family protein

DNA sequence :
ATGAAGAAAACGAAGTTCACCGAAGCACAAATCGTTTTTGCTCTCAAACAATCTGAGACTGGAGTGGCTGTAGCTGAAGT
ATGCCGCAAAATGGGTATTAGTGAGGCTACCTTTTACAATTGGAAGAAGAAGTATGGCGGATTAGGTGTTGCCGAATTGC
ACCGATTACGCCAGTTGGAAGAGGAAAACCGTCAGCTGAAACAGCTAGTGGCCGACCTAAGCTTGGACAAACAAATGCTT
CAGGATGTGCTCAAAAAAAAGCTTTAA

Protein sequence :
MKKTKFTEAQIVFALKQSETGVAVAEVCRKMGISEATFYNWKKKYGGLGVAELHRLRQLEEENRQLKQLVADLSLDKQML
QDVLKKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 6e-28 75
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 8e-28 75
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 7e-21 54
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-16 50
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-16 50
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-16 49
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-16 48