Gene Information

Name : Slin_1236 (Slin_1236)
Accession : YP_003386085.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : class II aldolase/adducin family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 1508087 - 1508788 bp
Length : 702 bp
Strand : -
Note : PFAM: class II aldolase/adducin family protein; KEGG: scl:sce3309 L-ribulose-5-phosphate 4- epimerase

DNA sequence :
ATGATGTATACATCCCTAAAAGAAGAATGTTACGAGGCTAATATGCAGCTTCCCAAGCTGGGGCTGGTGCTGTTTACGTT
CGGGAATGTTAGCGCGGTTGACCGCGAGCGGGCGGTGTTTGCCATCAAACCCAGCGGAGTTCCGTATGAAAAGCTGACGG
CCGACGATATTGTCATCTGCGATTATGAGGGTCGTGTTGTTGAGGGTCAGTTGCGGCCCTCATCCGATACAAAAACCCAC
GCGCTGCTCTATAAAACCTGGGATACCCTGGGAGGCATTTCCCATACCCACAGTACTCACGCCGTAGCCTGGTCGCAGGC
GGGCATGGATATTCCGATTTTCGGAACCACGCACGCTGACCATACGCACCAGGATATCCCCTGCGCCCCGGCGCTGACCG
ATGAGATGATTCAGGGCGATTATGAGCACGAAACGGGCCACCAGATCTTTAACTGCTTCTCCGAAAAAGGGTTGGTCCAT
ACGGAAATGGAAATGGTCCTACTGCAAAATCACGGGCCGTTTACGTGGGGCAAATCGGCCGAGAAAGCCGTTTACAACTC
CGCTGTATTGGAAGAACTGGCCCGAATGGCGTATCTAACCTTACAAATTAACCCCAATACACCCCGCATCAAGGATACGT
TACGATTAAAACACTACGAGCGCAAACACGGCAAAAACGCCTACTACGGACAGGGTTGCTAG

Protein sequence :
MMYTSLKEECYEANMQLPKLGLVLFTFGNVSAVDRERAVFAIKPSGVPYEKLTADDIVICDYEGRVVEGQLRPSSDTKTH
ALLYKTWDTLGGISHTHSTHAVAWSQAGMDIPIFGTTHADHTHQDIPCAPALTDEMIQGDYEHETGHQIFNCFSEKGLVH
TEMEMVLLQNHGPFTWGKSAEKAVYNSAVLEELARMAYLTLQINPNTPRIKDTLRLKHYERKHGKNAYYGQGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 6e-53 55