Gene Information

Name : Slin_1116 (Slin_1116)
Accession : YP_003385966.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1364886 - 1365545 bp
Length : 660 bp
Strand : +
Note : PFAM: alanine racemase domain protein; KEGG: hypothetical protein

DNA sequence :
ATGATCGCTGATACGATTCGCCTGATTGAGAGTGAATTACACGATAAGGCCAAGCTGATTGCCGTTACAAAAACGAAGCC
CGTCGAGTTACTGCGCGAAGCGTATGAGGCCGGTTGTCGTCGGTTTGGGGAAAACAAAGTACAGGAAATGGCGGAGAAAC
AGCCGCAACTTCCCGACGATGTGCAATGGCATCTTATTGGTCATTTGCAGACCAATAAAGTTAAATACATCGCTCCATTT
GTTGCTCTGATCCACTCGGTCGATAGCCTGAAGCTGTTGCAGGAAATAAACAAACAGGCTGCCAAATCCAATCGGGTAAT
CGACTGCCTGCTTCAAATCTATATTGCCGATGAGGAAACGAAGTTCGGCCTGTCGGCGGAAGAAGCAGAAGCGCTACTGA
ACGCACCTGAACTGGATGCCCTGTCACATATACGAATCGTTGGTCTGATGGGCTTGGCTACGAATACGGATGATACCGAT
AAAGTCCGGCTGGAATTTCGGGGGCTTAAAGAATTGTATGACAAGTTGGGCCAGATAAAGCGGCCAATGATTCAGTTTAG
CGAACTGTCGATGGGTATGAGTGGCGACTACCGCCTTGCCGTTGAGGAAGGGAGTACGCTGGTGCGAGTGGGTAGTGCTA
TTTTTGGAAGCCGAACCTGA

Protein sequence :
MIADTIRLIESELHDKAKLIAVTKTKPVELLREAYEAGCRRFGENKVQEMAEKQPQLPDDVQWHLIGHLQTNKVKYIAPF
VALIHSVDSLKLLQEINKQAAKSNRVIDCLLQIYIADEETKFGLSAEEAEALLNAPELDALSHIRIVGLMGLATNTDDTD
KVRLEFRGLKELYDKLGQIKRPMIQFSELSMGMSGDYRLAVEEGSTLVRVGSAIFGSRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-23 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-23 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-23 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-23 41