Gene Information

Name : Kfla_0601 (Kfla_0601)
Accession : YP_003378521.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 630489 - 631301 bp
Length : 813 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit

DNA sequence : 
ATGTTGCGCACCGAGAACCTCACCCTCGGGTACGCCGAGGAGCCGGTCGTGCGGGACTTGTCGATCGCCGTACCGGCCGG
GCGGATCACCGCGGTCGTCGGCGCCAACGCGAGCGGCAAGTCGACCCTGCTGCGCGGCCTCGCCCGGCTGCTCGCGCCGC
GCGGCGGCGGCGTCACCCTGGACGGCGTCGACCTGCGCCGCATCCCCGGCGGCGAGCTCGCGACCCGGCTCGGCCTGCTG
CCGCAGCAGCCGGTCGCCCCGGACGGCATCACGGTCGCCGACCTGGTCGGCCGCGGGCGGCATCCCCACCAGCGGTGGTT
CCGCCAGTGGTCCGTCGAGGACGAGCGGGTGGTCACCGAGGCGCTCGCCGCGACCGGTACGGCGGACCTGGCGAACCGCT
CGCTCGACCAGCTCTCCGGCGGCCAGCGGCAACGCGTCTGGATCGCGCTCGCGCTGGCCCAGGACGCGGACACGATGCTG
CTCGACGAACCGACTACGTTCCTCGACCTGGCCCACCAGCTGGAGATCCTCGACCTGGTGCACGACCTGAACCGCGACCA
CGGCAAGACCGTCGTGCTCGTGCTGCACGACCTCAACCTGGCCTGCCGCTACGCCGACCACCTGATCGCCCTCAAGCACG
GGGCGGTGGTGGCGACCGGGACGCCCGAGCAGGTGATCACGGCGGACGTGGTCGAGAAGGTCTTCGGGCTACCGTGTGCG
GTCATCCCGGACCCGCTGACCGGCACCCCGCTGGTCTTGCCCCGGCCGCGACGTACCGGCGTACCGGATGCTTCGGCGCG
CAGCCATCAGTGA

Protein sequence : 
MLRTENLTLGYAEEPVVRDLSIAVPAGRITAVVGANASGKSTLLRGLARLLAPRGGGVTLDGVDLRRIPGGELATRLGLL
PQQPVAPDGITVADLVGRGRHPHQRWFRQWSVEDERVVTEALAATGTADLANRSLDQLSGGQRQRVWIALALAQDADTML
LDEPTTFLDLAHQLEILDLVHDLNRDHGKTVVLVLHDLNLACRYADHLIALKHGAVVATGTPEQVITADVVEKVFGLPCA
VIPDPLTGTPLVLPRPRRTGVPDASARSHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-61 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-56 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-56 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-56 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-56 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-48 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-52 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-52 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_0601 YP_003378521.1 ABC transporter BAC0164 Protein 2e-48 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_0601 YP_003378521.1 ABC transporter VFG0925 Protein 2e-63 54
Kfla_0601 YP_003378521.1 ABC transporter VFG1042 Protein 1e-48 47