Gene Information

Name : Kfla_5788 (Kfla_5788)
Accession : YP_003383591.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6225607 - 6226293 bp
Length : 687 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ank:AnaeK_3000 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCCCCATGTCCTGGTCGTTGAAGACGACCTGAAGGTCCGCAACGCCCTGTTGCGTGCCCTGACCGAGCGGGGCTATGC
AACAAGCTCTGCAGGCGAAGGGCTGAGCGGTTTGTCGGAGCTCACCCACGGTAGTCCTGATCTTGTTCTGCTCGACCTCG
GATTGCCTGACATCGAGGGCGGGGAGTTGCTTCGGATGCTGCGCGTTGTGAGCCAGGTCCCGGTGATCGTGGTGACGGCG
CGGGATGATGAACAGCAGATGGTGGACATGCTGGACGGCGGCGCCGACGACTATCTGGTGAAACCCTTCGGGCCAGGGCA
GCTCGACGCCCGAATCCGCGCCGTACTGCGCCGTAGTGGCGTCGACCATCGACCCGGGGTGCTCACCGTCGGCGCTCTGA
TGATCGATCCGGCGGCACGCAGCGCTCGGTTGGACGGCGATGAGCTGGAGTTGGCACCGCGCGAGTTCGAACTGTTGCGC
TATCTGGCCGAGCGTGCGGGCGAGGTGGTAACCCGGCGGCAGTTGCTGGTCGAGGTCTGGCAACTGGCGTACGGAGGAGC
TGAGAAGACCGTCGACGTCCACCTGTCGTGGTTGCGCCGCAAGCTCGGTGAGACCGCACAGCAGCCCCGGTACCTACATA
CCGTGCGTGGAGTAGGCGTTCGGCTCACAGCGCCGCCGGGGACCTGA

Protein sequence : 
MPHVLVVEDDLKVRNALLRALTERGYATSSAGEGLSGLSELTHGSPDLVLLDLGLPDIEGGELLRMLRVVSQVPVIVVTA
RDDEQQMVDMLDGGADDYLVKPFGPGQLDARIRAVLRRSGVDHRPGVLTVGALMIDPAARSARLDGDELELAPREFELLR
YLAERAGEVVTRRQLLVEVWQLAYGGAEKTVDVHLSWLRRKLGETAQQPRYLHTVRGVGVRLTAPPGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator CP001138.1.gene4273. Protein 2e-21 43
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 9e-22 42
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator CP000647.1.gene4257. Protein 7e-21 42
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator NC_002695.1.915041.p Protein 2e-21 42
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator BAC0533 Protein 7e-21 42
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator CP000034.1.gene3834. Protein 2e-21 42
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 3e-18 41
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_5788 YP_003383591.1 winged helix family two component transcriptional regulator VFG0596 Protein 8e-25 41