Gene Information

Name : Kfla_5468 (Kfla_5468)
Accession : YP_003383278.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5905114 - 5905968 bp
Length : 855 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related

DNA sequence : 
ATGACCGCCCCTGTCCAGCTGACCGACGTCCGCAAGGTCTACGGCACCGGAGCCGGAGCCGTGACCGCGCTCGACGGGGT
CAGCCACAGGTTCGCCGAAGCGTCGTTCACCGCGGTGATGGGCCCGTCCGGCTCCGGCAAGAGCACGCTGCTGCACTGTG
CCGCCGGACTGGACGAGCCCAGCACCGGCGAGGTGCTGCTGGCCGGTACGCCGTTGCGCGGGCTCGGCGAGACCGCGCTC
ACCGAGCTCCGGCGCCGGCACGTCGCGTTCGTCTTCCAGGCGTTCAACCTGATGCCCGCGCTGACGGTCCGGCAGAACGT
GGTCCTGCCGCTGACGCTGGCCGGGCAGACGCCCGACCAGGCGTGGGTCGCCGAGGTGATCCGCCGGGTCGGTCTCGACG
AGCGGTCCGGGCACCGGCCGGGTGGACTCTCCGGCGGCCAGCAGCAGCGGGTCGCCATCGCCCGCGCGCTGGCCGTCCGG
GCCGCGATCACCTTCGCCGACGAACCCACGGGCGCGCTCGACACCCAGACGGCGCTCGAAGTCCTCACCCTGCTCCGCGA
CCAGTCTCGCATCGCCGGCCAGACCGTCGTCATGGTCACCCACGACCCCGTCGCCGCCTCGTACGCCGACCGCGTCGTCT
TCCTGGTGGACGGCCGGATCGTCTCCGAGCGGCCCACCCCGACCGCCGACCGAATCGCCTCCGAGCTCGCCCTGCTCTCC
CGCCCCGCACGGTCCAGCTCCCCCGCGGCCGGGGCGCCGTCACCCGCGGCGCGGGCCGCGTCGCCCGAGGCGCTGCGACG
GTCGTTCCGCTTTTCGGTGCCGCCGGCAACCGACGGCACCGGAGCGGCGCGATGA

Protein sequence : 
MTAPVQLTDVRKVYGTGAGAVTALDGVSHRFAEASFTAVMGPSGSGKSTLLHCAAGLDEPSTGEVLLAGTPLRGLGETAL
TELRRRHVAFVFQAFNLMPALTVRQNVVLPLTLAGQTPDQAWVAEVIRRVGLDERSGHRPGGLSGGQQQRVAIARALAVR
AAITFADEPTGALDTQTALEVLTLLRDQSRIAGQTVVMVTHDPVAASYADRVVFLVDGRIVSERPTPTADRIASELALLS
RPARSSSPAAGAPSPAARAASPEALRRSFRFSVPPATDGTGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_5468 YP_003383278.1 ABC transporter CP001581.1.gene798.p Protein 4e-36 46
Kfla_5468 YP_003383278.1 ABC transporter NC_008702.1.4606598. Protein 4e-30 45
Kfla_5468 YP_003383278.1 ABC transporter CP001581.1.gene598.p Protein 3e-39 44
Kfla_5468 YP_003383278.1 ABC transporter NC_012469.1.7686878. Protein 2e-34 44