Gene Information

Name : Kfla_5165 (Kfla_5165)
Accession : YP_003382979.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5567120 - 5567896 bp
Length : 777 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_2824 ABC transporter related

DNA sequence : 
GTGCACGTCGAGAACCTCACCCTGGCGTACGGGACCGACGAGCCGGTCGTGTCCGGACTCACCCTGGAGGTGCCGCGCGG
CCGGATGACCGCTGTGGTCGGCCCGAACGGCTCGGGCAAGTCCACCCTGCTGCGGGGCATGAGCAGGCTGCTCAAGCCGC
AGTCCGGTCAGGTCCTGCTCGACGGCAAGGACATCCACCAACTTCCCGCGCGCGAACTGGCCCGCCGGCTCGGCGTACTG
CCGCAGGGGCCGGTCACGCCGGAAGGCATTACCGCAGCCGAGCTGGTGTCGCGCGGCAGGCACCCGCACCGGGGCATGTT
CGCCCGGCTCACCGCTGAGGACCAGCAGGCGATCGAGGACGCGCTGGACGCGGTGGAGCTGGCCGAGCTCCGGGACCGGC
CGGTCGACCAGCTCTCCGGCGGCCAGCGGCAGCGGGTCTGGATCGCCATGGTGCTCGCCCAGGGCACTGAGCACCTCCTG
CTCGACGAGCCGACCACCTACCTCGACCTGGCGCACGCAGTCGACGTGATGAACGTCGTGCACGCCGCCGCGCACAGCTC
CGGCCGGACAGTGATCACCGTGCTGCACGACCTCACCCTGGCCGCGCAGTACGCCGACCACCTGGTGGTGATGGGCGAGG
GCCGGATCGCAGCGCAGGGGCGGCCGGTGGACATTCTCAGCGAGCGGCTGCTCGCGGATGTGTTCGGTCTGCGCGCGACC
ATCGTGGAGGTCGGCGGCGCACCGGTTGTCGTGCCCGACCGTACGCTGGCGGTATGA

Protein sequence : 
MHVENLTLAYGTDEPVVSGLTLEVPRGRMTAVVGPNGSGKSTLLRGMSRLLKPQSGQVLLDGKDIHQLPARELARRLGVL
PQGPVTPEGITAAELVSRGRHPHRGMFARLTAEDQQAIEDALDAVELAELRDRPVDQLSGGQRQRVWIAMVLAQGTEHLL
LDEPTTYLDLAHAVDVMNVVHAAAHSSGRTVITVLHDLTLAAQYADHLVVMGEGRIAAQGRPVDILSERLLADVFGLRAT
IVEVGGAPVVVPDRTLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-54 51
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-51 49
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-60 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-55 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-55 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-55 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-55 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-57 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-57 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-47 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-47 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-47 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-47 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 6e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_5165 YP_003382979.1 ABC transporter BAC0164 Protein 7e-55 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_5165 YP_003382979.1 ABC transporter VFG1042 Protein 6e-55 51
Kfla_5165 YP_003382979.1 ABC transporter VFG0925 Protein 4e-62 49