Gene Information

Name : Kfla_5118 (Kfla_5118)
Accession : YP_003382933.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 5520387 - 5521328 bp
Length : 942 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ank:AnaeK_2169 tyrosine recombinase XerD

DNA sequence :
ATGAGTGACATCGGGCGGGCGGTCAGCGCCTATCTCGACCACCTGACGGTCGAGCGCGGGCTGGCCGCCAACACCCTGGC
GTCGTACCGGCGGGACCTGCGCCGGTACGACGAGTACCTGGCCGGCGCGGGCATCTCCGCGCTCGGCCGGGTCACCGAAG
CGGTCGTCGGTGACTTCCTGATGCGGTTGCGGGAGGGCGACGAGCATCACCCGCCGCTGACCGCGTCCAGCGCGGGCCGC
ACGGTCGTCGCCGTCCGGGGGTTCCACAAGTTCTGCCTGCGGGAAGGGCTGACCGTGATCGACCCGGCGGCCGCGGTGAA
GCCGCCGGTCCCGCCGCAGCGGTTGCCGAAGGCCCTGTCCGTCGACGAGGTGACCCGGATCCTCGCGGCCGCGGCCGGTG
CCGACGCCGAACCCGCAGTCCTGGCGACCCGGGACGCGGCCCTGCTGGAGTTCCTCTACGGCACCGGCGCCCGGATCTCG
GAGGCGGTCGGGCTGGACGTGGACGACGTCGACCTGGAGTCCGGGCAGGTGCTGCTCCGCGGCAAGGGCAGCAAGGAACG
TGTCGTCCCGGTCGGCTCCTACGCCCGCGAAGCGCTCTCGGCGTACCAGGTGCGCGGCCGGCCCGATCTGGTCGCCCGCG
GTCGCGGGACGCACGCGCTGTTCCTCAACGCCCGGGGCGGCCGGCTGTCGCGGCAGAGCGCCTGGACGGTACTGCGGCGC
GCGGCGCAGCGGGCCGGGATCAGCAAGGAGATCTCGCCGCACACGCTGCGCCACTCGTTCGCCACGCATCTGCTCGACGG
CGGCGCCGACGTCCGGGTGGTGCAGGAGTTGCTCGGCCACGCCTCGGTGACGACGACCCAGGTCTACACGCTGGTCACCG
TCGACAAGCTGCGCGAGGTCTACGCGACGTCCCACCCGCGGGCCTTGTCGTCGGCTCCGTAG

Protein sequence :
MSDIGRAVSAYLDHLTVERGLAANTLASYRRDLRRYDEYLAGAGISALGRVTEAVVGDFLMRLREGDEHHPPLTASSAGR
TVVAVRGFHKFCLREGLTVIDPAAAVKPPVPPQRLPKALSVDEVTRILAAAAGADAEPAVLATRDAALLEFLYGTGARIS
EAVGLDVDDVDLESGQVLLRGKGSKERVVPVGSYAREALSAYQVRGRPDLVARGRGTHALFLNARGGRLSRQSAWTVLRR
AAQRAGISKEISPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDKLREVYATSHPRALSSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-29 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-29 41