Gene Information

Name : Kfla_3990 (Kfla_3990)
Accession : YP_003381839.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4274864 - 4275598 bp
Length : 735 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3665 efflux ABC transporter, ATP- binding/permease protein

DNA sequence : 
ATGCCCCCGTTGCTCGAGGCCCATGACCTGACCGCGACATTCCCCGGTCCCGACGGCGGTCCACCGGTCCAGGTACTGCG
GGGCGTGTCGCTCCGGGTGGAGCCCGGTGAGCTGGTGTCGATCGTCGGCCCCAGCGGCTCCGGCAAGTCCACCCTGCTGT
ACTGCCTGTCCGGCCTGCAGCCCGCCACTTCAGGCACCGTCCAGCTGCTCGGACAGCCACTGTCCACCCTGCGGCGGAGC
CAGCTCGCCAAGCTCCGTCGGGGACGCATCGGCTTCGTGTTCCAGTCCTACAACCTCATCCCCTCGCTCACGGCGCGGGA
GAACGTCGCCCTGCCCGCGCGGCTCGCCCGCCGCGACCTCACGGCCGCCGACGTGGACCGTGCTCTCGCACAGGTCGGAC
TCGCCGAGCGCGGAGGGCACCGGCCGGCCGCGCTGTCCGGCGGGCAGCAGCAGCGGGTCGCCATCGCCCGGGTGCTGGCC
ACCGGTCCGGAGATCGTGTTCGCCGACGAGCCGACCGGCGCGCTGGACACCACCGCCGGTGCCCAGGTACTCGATCTGCT
GCGGGCAACCGCGGCCGGGTCCCGATCGGTGGTGCTCGTCACCCACGACGTCGCGGCCGCCGCCCGGGCCGACCGGGTGC
TGGTTCTGCGCGACGGGCTGGTCTCTCGCGAACTCACCCGGCCGACTCCGGAGCAGGTGTTCGAGGAGATCACCGCGAAA
GACTCGGTGGGCTGA

Protein sequence : 
MPPLLEAHDLTATFPGPDGGPPVQVLRGVSLRVEPGELVSIVGPSGSGKSTLLYCLSGLQPATSGTVQLLGQPLSTLRRS
QLAKLRRGRIGFVFQSYNLIPSLTARENVALPARLARRDLTAADVDRALAQVGLAERGGHRPAALSGGQQQRVAIARVLA
TGPEIVFADEPTGALDTTAGAQVLDLLRATAAGSRSVVLVTHDVAAAARADRVLVLRDGLVSRELTRPTPEQVFEEITAK
DSVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-40 49
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-40 49
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-40 49
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_3990 YP_003381839.1 ABC transporter NC_008702.1.4606598. Protein 4e-28 49
Kfla_3990 YP_003381839.1 ABC transporter NC_012469.1.7686878. Protein 3e-32 45
Kfla_3990 YP_003381839.1 ABC transporter CP001581.1.gene598.p Protein 6e-31 43
Kfla_3990 YP_003381839.1 ABC transporter NC_012469.1.7685735. Protein 1e-25 43
Kfla_3990 YP_003381839.1 ABC transporter CP001581.1.gene798.p Protein 2e-29 42