Gene Information

Name : Kfla_3620 (Kfla_3620)
Accession : YP_003381476.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Resistance
Product : D-alanine/D-alanine ligase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1181
EC number : 6.3.2.4
Position : 3893318 - 3894346 bp
Length : 1029 bp
Strand : +
Note : KEGG: cvi:CV_2472 D-alanyl-alanine synthetase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp; protein of unknown function DUF201

DNA sequence :
ATGAAGATCGGAATTCTGTTCGGGGGCGTCTCCGAGGAACACCCCATCTCGCTCAAGTCCGCGCGCGAGGTCGCCCGCAG
CCTCGACCCCGAAAGGTACGAGCCGTACTACGTCGGGATCACCCGAGGCGGCGCCTGGATGCTCTGCGACGGCCCGGACG
ACGACTGGGAGAACGGCACGGGCCGCCCCGCCGTACTGTCACCGGACCGCACCGTGCACGGACTGCTCGTGCTGGAGCAG
GGCCGGTACGAGACGATCAGGCTCGACGTGGTGCTGCCCGTTCTGCACGGCAGGCTCGGCGAGGACGGTGCGATCCAGGG
CCTGCTGGAGCTCTCCGGTATCCCCTACGTCGGCTGCGACATCCCGAGTTCCGCGCTGTGCATGGACAAGTCCCTGGCTT
ACGTCGTCGCCCGGAGCGCGGGAATCGCCACGCCGAACTTCTGGACCGTCGCGGCCAAGGAACTCCCCGACGCCGACCTG
ACCTATCCGGTTTTCGTGAAGCCGGCCCGGTCAGGGTCGTCGTTCGGCGTCAGCAAGGTGACCCAGGCGGACGACCTGCC
GAGTGCTGTCGAAGTGGCGAGCCAGTACGACTCGAAGGTCCTGATCGAGCAAGCTGTCGTGGGCCGCGAGATCGGCTGTG
CGGTCCTGGGCAACGGTGGTGACCTGGTCGTCGGCGAGGTGGACCACATCGCGCTGTCGCACGGCTTCTTCCGGATTCAT
CAGGAGAGTGAGCCCGAGAGCGGTTCCGACAACTCGACGGCCATCGTTCCCGCCGACATCCCGGCCGCGTCGCGCACGCT
TGTTCGGGACACCGCCAAGGCCGTGTACCGGGCGCTCGGGTGCGGCGGCCTGGCGCGCGTCGACCTGTTCCTCACCGAGG
ACGGCGCGGTCGTGCTCAACGAGGTGAACACCTTGCCGGGGCTGACGTCGTACAGCCGCTACCCGAGAATGATGGCCGCC
GCAGGACTGTCGATGGGCGAAGTGATCGACCGCGTCGTCTCGCTGGCACTGACGGGCAACAAGCGATGA

Protein sequence :
MKIGILFGGVSEEHPISLKSAREVARSLDPERYEPYYVGITRGGAWMLCDGPDDDWENGTGRPAVLSPDRTVHGLLVLEQ
GRYETIRLDVVLPVLHGRLGEDGAIQGLLELSGIPYVGCDIPSSALCMDKSLAYVVARSAGIATPNFWTVAAKELPDADL
TYPVFVKPARSGSSFGVSKVTQADDLPSAVEVASQYDSKVLIEQAVVGREIGCAVLGNGGDLVVGEVDHIALSHGFFRIH
QESEPESGSDNSTAIVPADIPAASRTLVRDTAKAVYRALGCGGLARVDLFLTEDGAVVLNEVNTLPGLTSYSRYPRMMAA
AGLSMGEVIDRVVSLALTGNKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanB YP_008394259.1 Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase Not tested Not named Protein 1e-108 63
vanB NP_815951.1 D-alanine--D-lactate ligase Not tested Not named Protein 1e-107 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase AF310956.2.orf5.gene Protein 2e-108 63
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase NC_014475.1.orf3.gen Protein 2e-107 63
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase AY145441.gene.p01 Protein 1e-108 63
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase NC_005054.2598280.p0 Protein 2e-107 63
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase U35369.1.gene6.p01 Protein 6e-108 63
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase AE016830.1.gene2250. Protein 6e-108 63
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase U00456.gene.p01 Protein 6e-108 63
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase AF277571.gene.p01 Protein 3e-111 62
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase AY489045.gene.p01 Protein 3e-107 61
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase AF130997.1.orf4.gene Protein 4e-108 59
Kfla_3620 YP_003381476.1 D-alanine/D-alanine ligase AF162694.gene.p01 Protein 2e-53 41