Gene Information

Name : Kfla_3456 (Kfla_3456)
Accession : YP_003381313.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3715369 - 3716136 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: saz:Sama_1468 putative macrolide efflux ABC transporter, ATP-binding protein

DNA sequence : 
ATGCCCCACCCGGTACCGCCTGCCTGGCACCAAGCCGACGGCCGGCCGCCCGCGCTGCTGCTGGACGGGATCACCAAGAC
CTACCGGTCCAAGGCCGGGGCGGTGGATGCGCTGCGCGGTGTGACCTACCACTTCCAGCAGGGGTCCTTCACCGCGGTGA
TGGGACCGTCCGGATCCGGCAAGTCGACGCTGCTGCAGTGCGCGGCCGGCCTCGACAAACCGACCACCGGGGCCGTCGTG
CTCAACGGGACGCCCCTGCACGGCCTCTCCGAGGTCGCGCTGACCAAGCTGCGCCGCGAGCAGATGGGTTTCGTCTTCCA
GGCCTACAACCTGCTGCCGTCGCTCACCGTCTACGACAACGTCGCGCTGCCGCTCCGGCTGACCGGTCGCCGCCCGCAGC
GGCGAGACGTTCACCAGGTGCTCCAGCAGGTCGGACTGGAGGACAAAGCAGGCCGCCGCCCCGCGGAGCTCTCCGGCGGC
CAGCAGCAGCGGGTCGCCATCGCTCGCGCACTGATCACCCGCCCAGCGGTGTTCTTCGCCGACGAGCCCACCGGTGCGCT
CGACAGCAAGACCAGCCGCCAGATCCTCGACCTGTTGCGGTCGGCAACCGACGCCAGCGGGCAGACCGTCGTCATGGTCA
CCCACGACCCGCTGGCCGCCGCGTACGCCGACCGGGTGGTCTTCCTGTCCGACGGTGTCGTGGCCGGCTCCCTCGACCGC
GGCACCCCGCAGCAGATCGCCGCCGCGATGAGCGACCTGGAGCGCTGA

Protein sequence : 
MPHPVPPAWHQADGRPPALLLDGITKTYRSKAGAVDALRGVTYHFQQGSFTAVMGPSGSGKSTLLQCAAGLDKPTTGAVV
LNGTPLHGLSEVALTKLRREQMGFVFQAYNLLPSLTVYDNVALPLRLTGRRPQRRDVHQVLQQVGLEDKAGRRPAELSGG
QQQRVAIARALITRPAVFFADEPTGALDSKTSRQILDLLRSATDASGQTVVMVTHDPLAAAYADRVVFLSDGVVAGSLDR
GTPQQIAAAMSDLER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 49
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-43 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-43 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-43 47
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_3456 YP_003381313.1 ABC transporter NC_008702.1.4606598. Protein 2e-39 46
Kfla_3456 YP_003381313.1 ABC transporter CP001581.1.gene598.p Protein 6e-45 46
Kfla_3456 YP_003381313.1 ABC transporter NC_012469.1.7686878. Protein 1e-44 46
Kfla_3456 YP_003381313.1 ABC transporter CP001581.1.gene798.p Protein 4e-42 43