|
Name : Kfla_0202 (Kfla_0202) Accession : YP_003378129.1 Strain : Kribbella flavida DSM 17836 Genome accession: NC_013729 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 209438 - 210712 bp Length : 1275 bp Strand : + Note : KEGG: bpy:Bphyt_1044 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : GTGATCGATGCCAAACTGCTCCGTGACAACCCCGATGTCGTCCGCGCGGCCCTGACCAAGCGCGGCGAGAGTCCGGCCCG GGTCGACGAGATCCTGGTCGCCGACGGGGAGCGTCGATCGTCGATCGCCGCCTTCGAGGCGCTGCGGGCCGAGCAGAAGG GCCTCGGCAAGCAGGTCGCGCAGGCCAAGGGCGACGAGCGCGCCGCGCTGCTGGAGCGGACCAAGGCGCTGGCGGCCGAG GTGAAGGCCCACGAGGCGACCGCGAACGAGGCGGAGCGCCGCTTCGACCAGCTCTCCCGTGCCCTGCCGAACCTGGTCTC CGACGAGGCGCCGGTCGGCGGCGAGAGCGACTACGTGGTGGTGGAGGAGATCGGCAAGCCGCGCGACTTCGCCGCCGAGG GCTTCGAGCCGCGCGACCACCTGGAGCTCGGCGAGCTGCTCGGCGCGATCGACATGGAGCGCGGCGCGAAGGTGTCCGGC GCCCGGTTCTACTTCCTCAAGGGTGTCGGCGCCCAGCTCCAGCTCGGCATGCTGCAGCTGGCGATCAACCAGGCGGTGGA GTACGGCTTCACCCCGATGATCACGCCCACTCTGGTCAAGCCCGAGGTGATGGACGGCACCGGGTACCTGAACGCCCACG ACGACGTCTACCGGCTGCAGGAGCCCGAGCTCTACCTGGTCGGGACGTCGGAGGTGTCGCTGGCCGGCTACCACATGGAC GAGATCCTCGACCTGTCCGGCGGCCCGGTGCGGTACGCCGGGTGGTCGTCCTGCTACCGCCGCGAGGCCGGCTCGTACGG GAAGGACACCCGCGGGATCATTCGTGTCCACCAGTTCGACAAGGTGGAGATGTTCTCCTACTGCAGCCTCGAGGACGCCG AGGCGGAGCACCAGCGGCTGCTGGGCTGGGAGAAGGAGATGCTCGACAAGATGGAGCTGGCCTACCGGGTGATCGACACC GCGACCGGCGACCTGGGCGCCTCGGCGTACCGGAAGTTCGACTGCGAGGCGTGGGTGCCGACCCAGGGCGCCTACCGCGA GCTCACCTCGACGTCGAACACGACCGACTACCAGGCCCGCCGGCTGAACATCCGGCACCGTGACGCCGAGGGCAGGACCC GGCACGTCGCCACGCTGAACGGCACGCTCGCCACCACCCGGTGGATCGTGGCGATCCTGGAGACGCACCAGCTGCCCGAC GGCTCGGTCCGGGTCCCGGCCGCGCTGCGCCCGTACGTCGGCGGCCGCGAGGTCCTCGAACCGGCCCGCGGATGA Protein sequence : MIDAKLLRDNPDVVRAALTKRGESPARVDEILVADGERRSSIAAFEALRAEQKGLGKQVAQAKGDERAALLERTKALAAE VKAHEATANEAERRFDQLSRALPNLVSDEAPVGGESDYVVVEEIGKPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSG ARFYFLKGVGAQLQLGMLQLAINQAVEYGFTPMITPTLVKPEVMDGTGYLNAHDDVYRLQEPELYLVGTSEVSLAGYHMD EILDLSGGPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFSYCSLEDAEAEHQRLLGWEKEMLDKMELAYRVIDT ATGDLGASAYRKFDCEAWVPTQGAYRELTSTSNTTDYQARRLNIRHRDAEGRTRHVATLNGTLATTRWIVAILETHQLPD GSVRVPAALRPYVGGREVLEPARG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-69 | 43 |
