Gene Information

Name : Kfla_2010 (Kfla_2010)
Accession : YP_003379900.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2101731 - 2102477 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_0248 ABC transporter related

DNA sequence : 
ATGAGCGTCCTGTCGGTACAAGGCGTGGCCGTCGAGCTCGGCGGCCGGCAGGTCCTGCACGACGTGGACCTGCGGGTGAC
GGAATCCGAGCACGTCGGCCTGATCGGGCCGAACGGAGCCGGCAAGACCACCTTGCTGCGCGCGCTGCTCGGGCTGCTGC
CGATCCGCAGCGGCTCGATCACCATCGACGGACGGACGCCGGCCCAGGTCCGCGGCACGATCGGGTACGTCCCGCAGCGG
CACGAGTTCGTCTGGGACTACCCCGTGGATGTCGGTACGGCGGTGATGACCGGCCGCACGCATCACATCGGCTGGCTGCG
CCGCCCTGGCCGAGCCGATCGGAGCGCCGTCGCCGAGGCACTCGAGCGCGTTGACCTGACTGATCTCGTACGCCGTCCGA
TCGGCGAACTGTCCGGCGGCCAGCGGCAGCGCGTGCTGGTCGCCCGCGCACTGGCCCTGCGGCCCCGACTGCTGCTGCTG
GACGAACCGTTCACCGGCCTCGACGTCCCCACCCAGGAGATCCTCACCCAGTTGTTCCGGAGCCTCACCGCCGAGGGCAC
CGCGATCTTGATGACCACGCACGACCTTCCGGCCGCCGCGGAGACGTGCAGCCGGCTGTGTCTGCTGAACGAAACCGTCG
TCGCCGACGGTCCTCCGGACGAGTTGCGCGACCCGGCCGTCTGGCTGCGCGCGTTCGGCGTCGCCAGGTCCGAGCAGTTG
CTGCACAGCCTGGGAGTGGCCCGATGA

Protein sequence : 
MSVLSVQGVAVELGGRQVLHDVDLRVTESEHVGLIGPNGAGKTTLLRALLGLLPIRSGSITIDGRTPAQVRGTIGYVPQR
HEFVWDYPVDVGTAVMTGRTHHIGWLRRPGRADRSAVAEALERVDLTDLVRRPIGELSGGQRQRVLVARALALRPRLLLL
DEPFTGLDVPTQEILTQLFRSLTAEGTAILMTTHDLPAAAETCSRLCLLNETVVADGPPDELRDPAVWLRAFGVARSEQL
LHSLGVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-26 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-26 43
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-26 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-26 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_2010 YP_003379900.1 ABC transporter BAC0350 Protein 1e-26 43
Kfla_2010 YP_003379900.1 ABC transporter BAC0440 Protein 2e-25 42
Kfla_2010 YP_003379900.1 ABC transporter BAC0400 Protein 4e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_2010 YP_003379900.1 ABC transporter VFG0526 Protein 1e-26 43