Gene Information

Name : Kfla_1375 (Kfla_1375)
Accession : YP_003379276.1
Strain : Kribbella flavida DSM 17836
Genome accession: NC_013729
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1444147 - 1444827 bp
Length : 681 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_2007 two component transcriptional regulator, winged helix family

DNA sequence : 
GTGGTGGAGGACGAGGAAGGCCTGGTCAGCGCGCTGCGCTCGGGACTGGGCCGGGCCGGCTATGCCGTCGACACGGCGCT
GACCGGTGCGGAGGCGGTGGAGAAACTGGCGACCACGGCGTACGACCTGGCGATCCTGGACATCACGCTGCCGGACACCA
ACGGGCTCGACCTGTGCCGGGCGGTCCGCCGGGGCGAGATCGAGGTGGCGTCCGGGCGCGAGCTGCGGGTGCTGATGCTG
ACGGCCCGCGCCTCGCTGGCCGACCGGGTCCGCGGCCTGGACGAGGGTGCCGACGACTACCTCACCAAACCGTTCGCGCT
GGTCGAGCTGCTGGCCCGGATCCGCGCGCTGCTGCGTCGCGACGTGACGAACGGGACCACCCAGCTGCACGTCGGCGAAC
TGGTGCTGGACTCGTCGCGGCACCTGGCCACCCGGGGCGGGCGCGAGCTGTCGCTGACGCTCAAGGAGTTCGGCGTGCTG
CGGTACCTGATGTCGCGGCCCGGGCACGTCGTGTCGGCGGAGGAACTGCTGGAGCACGTCTGGGACGAGAACGCCGATCC
GTTCACCCAGAGCGTCCGGGTGACCGTCGGCACCCTGCGGCGCAAGCTCACCCAGGAGGGCGAGGAGCCCTTGCTGGAAA
CGGTGATCGGCCGAGGCTACCGACTCCGAGGTGCAACATGA

Protein sequence : 
MVEDEEGLVSALRSGLGRAGYAVDTALTGAEAVEKLATTAYDLAILDITLPDTNGLDLCRAVRRGEIEVASGRELRVLML
TARASLADRVRGLDEGADDYLTKPFALVELLARIRALLRRDVTNGTTQLHVGELVLDSSRHLATRGGRELSLTLKEFGVL
RYLMSRPGHVVSAEELLEHVWDENADPFTQSVRVTVGTLRRKLTQEGEEPLLETVIGRGYRLRGAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_1375 YP_003379276.1 winged helix family two component transcriptional regulator Y16952.3.orf35.gene. Protein 2e-32 47
Kfla_1375 YP_003379276.1 winged helix family two component transcriptional regulator U82965.2.orf14.gene. Protein 4e-29 45
Kfla_1375 YP_003379276.1 winged helix family two component transcriptional regulator BAC0083 Protein 2e-29 45
Kfla_1375 YP_003379276.1 winged helix family two component transcriptional regulator BAC0111 Protein 7e-27 41
Kfla_1375 YP_003379276.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Kfla_1375 YP_003379276.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-25 43
Kfla_1375 YP_003379276.1 winged helix family two component transcriptional regulator VFG0596 Protein 6e-28 41