Gene Information

Name : pilR (XALc_0668)
Accession : YP_003375174.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Virulence
Product : two-component system response regulator protein pilr
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 724344 - 725732 bp
Length : 1389 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGAAACCCGAAGCGCCCTGATCGTCGACGACGAGCGCGACATCCGCGAGTTACTGGTCCTGACCCTGGGCAGGAT
GGGCCTGCGCATCAGCACCGCCGCCAATTTGGCCGAAGCGCGCGAATTGCTGGCGAGCAATCGCTACGACCTGTGCATCA
CCGACATGCGCCTGCCCGACGGCAACGGCATCGAACTGGTCAGCGAGATTGCCAAGCACTATCCGCACACACCGGTGGCG
ATGATCACCGCCTTCGGCAGCATGGATCTGGCGGTGGAGGCGCTGAAGGCCGGCGCGTTCGACTTCGTCAGCAAGCCGGT
CGACATCCAGATTCTGCGCGGCCTGGTCAAGCACGCGCTGGAACTCAACAACGCAACGCGTGCCGCCGCGCCAATCCCGG
CGCCGGAACATGCCAGCCGCCTGCTCGGCGCATCGGCGGCGATGGAGGCGCTGCGCAACACCATCGCCAAGGTGGCACGC
AACCAAGCGCCGGTCTATATCCTCGGCGAATCGGGCGTGGGCAAGGAACTGGTCGCCCGCACCATCCACGAACAGAGCGC
GCGCGCGGTCGGACCGTTCGTCCCGGTGAACTGCGGCGCGATCCCCGCCGAACTGATGGAAAGCGAGTTCTTCGGGCATA
AGAAAGGCAGCTTCACCGGCGCGCATGCTGATCAGGCCGGCCTGTTCCAGGCCGCGCACGGCGGTACCTTGTTCCTCGAC
GAAGTCGCCGAACTGCCGTTGCCGATGCAGGTCAAGTTGCTGCGCGCGATCCAGGAAAAATCGGTGCGCCCGGTCGGCGC
CGCCACGGAAGTGCCGGTGGACGTGCGTATTCTCTCGGCAACCCACAAGGACCTGGCCGACCTGGTCGCCGAGGGCCGCT
TCCGCCACGACCTGTATTACCGCATCAACGTGATCGAACTACGCGTGCCGCCGCTGCGCGAACGTGCCAGCGACCTGCCG
CACCTGGCCGCGGCGATTCTGTTGCGGCTGGCCAAGAGCCACGACCGGCCGGCCCCGTTGCTCTCGTCCTCCGCACTGGA
CGCGCTGAGCGGCTACGCCTTCCCCGGCAACGTGCGCGAACTGGAGAACATCCTCGAACGCGCCCTGGCGATGGCCGACG
ACGACCAGATCGATGCCGCGGATCTACGCCTCCCGCAACCCGGCAACAGCGCCCGGGCGGCGGCCGAGGCCGCCCCGGCG
CTGCCGCCCGGCGTGGTCGACATCGATCCCGGTTCCTCGGCGCTGCCCACCTATATCGAGCAGCTCGAACGCGCGGCGAT
CCAGAAAGCGCTGGAAGAAAACCGCTGGAACAAGACCCGTACCGCCGCGCAGCTCGGCATCACCTTCCGCGCCCTGCGCT
ACAAACTGAAAAAGCTGGGTATGGAATAG

Protein sequence : 
MNETRSALIVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNRYDLCITDMRLPDGNGIELVSEIAKHYPHTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIQILRGLVKHALELNNATRAAAPIPAPEHASRLLGASAAMEALRNTIAKVAR
NQAPVYILGESGVGKELVARTIHEQSARAVGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADQAGLFQAAHGGTLFLD
EVAELPLPMQVKLLRAIQEKSVRPVGAATEVPVDVRILSATHKDLADLVAEGRFRHDLYYRINVIELRVPPLRERASDLP
HLAAAILLRLAKSHDRPAPLLSSSALDALSGYAFPGNVRELENILERALAMADDDQIDAADLRLPQPGNSARAAAEAAPA
LPPGVVDIDPGSSALPTYIEQLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-96 47
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-96 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_003375174.1 two-component system response regulator protein pilr BAC0089 Protein 3e-64 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_003375174.1 two-component system response regulator protein pilr VFG1214 Protein 1e-118 62
pilR YP_003375174.1 two-component system response regulator protein pilr VFG0116 Protein 2e-55 44