Gene Information

Name : XALc_2647 (XALc_2647)
Accession : YP_003377119.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Unknown
Product : shufflon-specific DNA recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3131487 - 3132581 bp
Length : 1095 bp
Strand : -
Note : -

DNA sequence :
ATGGCGACCATCGTCAAGACACCCTCAGGCACATGGAAGGCGCTCATCCGCAAGACGGGATGGCCGGCCACAGCCAAGAC
CTTCCGCACCAAACGCGACGCCGAGGATTGGGCGCGGCGCACCGAAGACGAAATGGTGCGCGGCATTTATATCCAGCGTG
CGCCGTCCGAACGCATGACCATCGAGGACGCACTCAAGCGCTATCTTTCCGAAGTTTCCCCAACCAAGCGCCAGGCATCG
GCCGACAGCGACGCGAGACACGCGAAGCCATTGATGCAGAATCTGGGCAGGTATTCGTTGGCCGCACTGACGCCGGAACT
GATCGCCAAGTACCGCGACGACCGGCTCGCTGGCCTGGATCGCAAAGACGCCAAGGGCAAGCCCGCCCCCAAGCCCCGTT
CGCCCAACACGGTCCGTCTCGATCTCGCATTGCTCGGCCACCTGTTCAACGTAGCGATCAAGGAATGGGGCATCGGCCTG
ACCTACAACCCCGTGCAAAGCATTCGCCGTCCTGCGCCCAGCCCAGGACGGGATCGACGGCTCACTCGAGAGGAAGAAAT
CCGCTTGATGGTCGCGGTCGATGCTCACTCGAACCCGATGCTCGGCTGGATCGTGCGCATCGCGCTCGAAACAGGAATGC
GTTCTTCGGAGATTACGGGCTTGCGCCGAAGCCAGGTCGATCTTGACCGGCGCGTGGCACGCCTCCAGGAAACGAAGAAC
ACGATGTCGCGTACCGTTCCTCTGACGGTCGAGGCAACCCGGCTGTTTCGAGAGGCGCTGAACAACCCGGTGCGCCCAAT
TGATACCGACCTGATCTTTTTCGGTGAGCCCGGACGTGACAACAAGCGCCGGGCTTATCAGTTCAATCCGATCTGGATGC
GCATCAAGAAGGATGCCGGCTTGCCGGACTTCCGCTTTCACGATCTGCGTCACGAAGCCGTAAGCCGCTTTGTGGAAGCA
GGCTTGTCCGACCAGGAGGTCGCGGCCATCAGCGGCCACAAGTCGATGCAGATGCTCAAGCGATACACTCACCTGCGCGC
GGAGGACTTGGTGGGCAAGCTCGATCAGGTCGCGAAAAAGACAGGAAATCCATGA

Protein sequence :
MATIVKTPSGTWKALIRKTGWPATAKTFRTKRDAEDWARRTEDEMVRGIYIQRAPSERMTIEDALKRYLSEVSPTKRQAS
ADSDARHAKPLMQNLGRYSLAALTPELIAKYRDDRLAGLDRKDAKGKPAPKPRSPNTVRLDLALLGHLFNVAIKEWGIGL
TYNPVQSIRRPAPSPGRDRRLTREEEIRLMVAVDAHSNPMLGWIVRIALETGMRSSEITGLRRSQVDLDRRVARLQETKN
TMSRTVPLTVEATRLFREALNNPVRPIDTDLIFFGEPGRDNKRRAYQFNPIWMRIKKDAGLPDFRFHDLRHEAVSRFVEA
GLSDQEVAAISGHKSMQMLKRYTHLRAEDLVGKLDQVAKKTGNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13530.1 site-specific recombinase Not tested PAGI-8 Protein 6e-117 65
rci NP_458640.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 3e-39 41
rci NP_807850.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 3e-39 41
rci AAC38070.2 Rci Not tested SPI-7 Protein 2e-39 41