Gene Information

Name : XALc_2270 (XALc_2270)
Accession : YP_003376743.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Unknown
Product : isxcc1 transposase orfa protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2701233 - 2701499 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGCGCAAGAGCAAGTTCACCGAGAGCCAGATCGTCGCCACGCTGAAGCAGGTGGAGGGCGGTCGCCAGGTCAAGGATGT
ATGCCGTGAGCTGGGCATTTCCGAGGCGACGTACTACGTCTGGAAGTCCAAGTACGGCGGCATGGAGGCTGCTGAGGTGC
AGCGCCTTCGGGACCTGGAAACCGAACACGGCAAGCTCAAGCGAATGTATGCCGAGCTTGCGATGGAAAACCATGCATTG
AAGGATGTCATCGCAAAAACATTGTAG

Protein sequence :
MRKSKFTESQIVATLKQVEGGRQVKDVCRELGISEATYYVWKSKYGGMEAAEVQRLRDLETEHGKLKRMYAELAMENHAL
KDVIAKTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 7e-26 64
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-20 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-20 52
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-17 47
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-17 47
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-17 46
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-17 46