Gene Information

Name : XALc_2105 (XALc_2105)
Accession : YP_003376580.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 2480082 - 2481584 bp
Length : 1503 bp
Strand : -
Note : -

DNA sequence :
ATGACCGTACCCCGTCCCCATGACGCCTGGCAGGCAATGGCTATGTCGCTGTGCTTGCGCACTCAAGCTTTCATCGATGG
ACGTTACGTCGATGCGGCCAGCGGCGAGACTTTCGACTGCATCAGCCCCATCGACGGTCGTTTGTTGGGGCGGGTCGCCG
CGGGCGAGGCGGAAGACATCGCTCGGGCGGTTGCCGCAGCGCGGCGCAGCTTCGATCTCGGACACTGGTCGCAGGCCAGG
CCGGTGCAGCGCAAGAAGACCCTGCTGGCGCTGGCGCAATTGGTCGAACGGCATGCCGACGAACTGGCGCTGCTGGAATC
GCTGGACATGGGCAAGCCGGTACGCGATGCGCGGCGTGTGGACTTGCTGGCGACGGTGCGCTGCCTAGCCTGGAGCGCCG
AGGCGGTGGACAAGATCTATGGCGAGGTGGCGCCGACGGGGCAGGACGAACTGGGCCTGATCACGCGCGAACCATTGGGG
GTGATCGGCGCGATCGTGCCGTGGAATTTTCCGTTGTTGATGGCGGCATGGAAGATCGCTCCGGCATTGGCGGCCGGCAA
TTCGGTGGTACTCAAACCGTCGGAGAAATCGCCCTTAAGTGCACTGCGCCTAGCCGAACTGGTCGCCGAGGCGGGTATTC
CCGATGGCGTGTTCAATGTGGTGCCCGGCTTCGGCAAGCGTGCCGGTGAACCGCTGGCATTGCACATGGATGTGGACGGA
TTGGTATTCACCGGCTCCACTCCGGTCGGCCGACATCTGCTGCAGTGTGCCGGGCAATCGAATATGAAGCGTGCTTACGT
GGAGTGCGGCGGCAAGAGCCCGAGTCTGGTGTTCGCCGATGCACCGGACTTGGAGCAGGCCGCGCAGGCGATGGCCTATG
CGATCTTCTACAATCAGGGCGAGGTCTGTACGGCGGCCTCGCGCCTGCTGGTGGAGCGTTCGATCAAGGATAGCTTCGTC
GCCCGCGTGGTCGCGGCTGCTAGGGTGCTGCAACCCGCACATCCGTTCGATGAGACGGCGTCGATGGGCGCGCTGGTCGA
CGAGGCGCAGACCCGGCGGGTACTCGACTATATCGCCCGCGGCAGCGAAGAAGGCGCGCGATTGCTGCTTGGCGGCAAAC
GCGTGGAGGTGGTGCCAGGCGGTTGTTATGTCGAGCCAACTATCTTTGACGAGGTCGGCCACGATCACACCATCGCCCGC
GAGGAGATCTTCGGGCCGGTGCTGTCGGTGATCGCTTTCGACGACGAAGCACACGCTTTGCGCATGGCTAACGACAGCGT
CTACGGTCTGGCCGCCGGTGTGTGGACCCGCGACATCGGTCGCGCCCATCGCGTGGCGCGGCGGCTGCGTGCCGGCAGTG
TGTGGGTGAACTATTGGGACGGCGGCGACATGACCGCACCGTTCGGCGGCTACAAGCAATCCGGTAACGGCCGCGACAAG
TCGTTGCATGCCTTCGATAAGTACACGGAGATGAAGGCGACTTGGATCAATTTGCGGACGTAA

Protein sequence :
MTVPRPHDAWQAMAMSLCLRTQAFIDGRYVDAASGETFDCISPIDGRLLGRVAAGEAEDIARAVAAARRSFDLGHWSQAR
PVQRKKTLLALAQLVERHADELALLESLDMGKPVRDARRVDLLATVRCLAWSAEAVDKIYGEVAPTGQDELGLITREPLG
VIGAIVPWNFPLLMAAWKIAPALAAGNSVVLKPSEKSPLSALRLAELVAEAGIPDGVFNVVPGFGKRAGEPLALHMDVDG
LVFTGSTPVGRHLLQCAGQSNMKRAYVECGGKSPSLVFADAPDLEQAAQAMAYAIFYNQGEVCTAASRLLVERSIKDSFV
ARVVAAARVLQPAHPFDETASMGALVDEAQTRRVLDYIARGSEEGARLLLGGKRVEVVPGGCYVEPTIFDEVGHDHTIAR
EEIFGPVLSVIAFDDEAHALRMANDSVYGLAAGVWTRDIGRAHRVARRLRAGSVWVNYWDGGDMTAPFGGYKQSGNGRDK
SLHAFDKYTEMKATWINLRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-123 56
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-77 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-78 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-78 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-78 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-78 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XALc_2105 YP_003376580.1 aldehyde dehydrogenase VFG0082 Protein 1e-77 43