Gene Information

Name : XALc_1872 (XALc_1872)
Accession : YP_003376352.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Unknown
Product : is1404 transposase orf a protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2191884 - 2192147 bp
Length : 264 bp
Strand : +
Note : -

DNA sequence :
GTGAAGAAGCGCTTTTCCGAAGAGCAGATCATCGGCTTCCTGCGTGAAGCCGAAGCCGGCGTGGCGGTGAAGGATCTGTG
CCGGCGGCACGGGTTCAGCGAGGGGTCCTACTACCTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCGGAGGCCAAGC
GGCTCAAGGAGCTGGAGGCGGAGAACACGCGGCTGAAGAAGCTGCTGGCCGAGCAGTTGTTCGAGAACGACGTCATTAAG
GACGCCCTGCGAAAAAAGTGGTGA

Protein sequence :
MKKRFSEEQIIGFLREAEAGVAVKDLCRRHGFSEGSYYLWRSKFGGMSVPEAKRLKELEAENTRLKKLLAEQLFENDVIK
DALRKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 8e-26 66
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 8e-26 66
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 4e-26 66
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-25 66
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 5e-17 49
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-15 42
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-15 42