Gene Information

Name : lolD (XALc_1819)
Accession : YP_003376300.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2141813 - 2142562 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAAGCAACCGCAATCGGAGATGGCGCATCGTCAACCTGCGGGGTCGCCGTTGGGCGGGGAGGCCGTTCGCGCCGA
AGCGTTGGCCAAGACTTACGCCGAAGGCAAGATGCGCACGCCGGTGTTCGACGCACTGGACCTGAGTGTGGCCCCGGGTG
AGACGGTGGCCATCGTCGGCGCCTCCGGTGCAGGCAAAAGCACTTTGTTGCACCTGCTTGGCGGCCTCGACGTGCCTACC
TCAGGCGAGGTCTACGTCGCCGGGCAGCGCATGTCGGCGCTGACCGACGCGGCGCGTGGGCAGCTGCGCAACCGCTCGCT
GGGTTTCGTCTATCAGTTCCATCATTTGTTGCCCGAATTCACCGCGTTGGAAAACGTGATGATGCCGGTATTGCTGAGTG
GAGCGCAGGTGAACGAAGCCGATGCGCGCGCGCGCGCCTTGCTGGAATCGGTGGGTCTGGGGCATCGCCTGGAGCACAAG
CCGGGTGAATTGTCCGGTGGCGAACGCCAGCGTGCCGCGGTGGCGCGTGCCCTGGTCAACCGTCCGGCCTGTGTGCTCGG
CGACGAGCCCACCGGCAATCTCGACGACAAGACCGCCGCCAACGTGTTCGCGCTGATGCTCGAACTCAATCGCGCACATG
GGACCAGCCTGGTGCTGGTCACCCACGACCGCAGTCTGGCGCGCAAGCTCGACCGTGTGCTGGAACTGCACCAGGGCAAG
CTGCGCGAACTCGCGCTCGCCGAGGTCTGA

Protein sequence : 
MSKQPQSEMAHRQPAGSPLGGEAVRAEALAKTYAEGKMRTPVFDALDLSVAPGETVAIVGASGAGKSTLLHLLGGLDVPT
SGEVYVAGQRMSALTDAARGQLRNRSLGFVYQFHHLLPEFTALENVMMPVLLSGAQVNEADARARALLESVGLGHRLEHK
PGELSGGERQRAAVARALVNRPACVLGDEPTGNLDDKTAANVFALMLELNRAHGTSLVLVTHDRSLARKLDRVLELHQGK
LRELALAEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_003376300.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-36 43
lolD YP_003376300.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-31 42