Gene Information

Name : XALc_1768 (XALc_1768)
Accession : YP_003376254.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Virulence
Product : two-component system regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2086088 - 2086792 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATTCTGGTCGCCGAAGACGATACTTCCATTGCCGTCGCGCTGCGCGATTCGCTTGTCGAATGCGGCCATGTGGT
CGACCACGTCAGCGATGGCACCGCGGCCGATCACGCGCTCCTCGCCGAGTCCTACCATCTTCTGGTGCTGGATCTAGGCC
TGCCGCGCCAGGACGGGCTGCAAGTACTGCAACGTTTGCGCGAACGCCGCGACGAGATTCCGGTTCTCGTGGTGACCGCG
CGCGATGCGGTGGAGGACCGTATCCACGCACTCGACCAAGGCGCCGACGACTATCTCATCAAGCCGTTCGAACTGTCCGA
ATTTCTGGCCCGCACCCGCGCACTACTACGTCGCAGCAGCAGCGGCGGCGTCCCTGAACTGGTTTTGGGCCAATTGCGGA
TCAACTTGGCCGGGCGCCGCGTCTGGCTACAGGATCAGCCGCTGGACCTGACCGCACGCGAATTTGCCTTACTGGAAACC
CTGCTGCTACGCAGCGGGCGCGTGGTCAGCCGTGGCCAGTTGACCGAAGCGCTGTGCGATTGGCAGCACGAAATCACCGA
CAATGGCCTGGACATCTCCATGCACCGCCTGCGCCGCAAACTGCACGGCACTGGGGTCGGCATCCGCACCATCCGTGGAC
TAGGTTACATGCTGGAAGAATCGCACGCTACCGCATCCACCACTGACGCGCCGCCCCCGCAGTGA

Protein sequence : 
MRILVAEDDTSIAVALRDSLVECGHVVDHVSDGTAADHALLAESYHLLVLDLGLPRQDGLQVLQRLRERRDEIPVLVVTA
RDAVEDRIHALDQGADDYLIKPFELSEFLARTRALLRRSSSGGVPELVLGQLRINLAGRRVWLQDQPLDLTAREFALLET
LLLRSGRVVSRGQLTEALCDWQHEITDNGLDISMHRLRRKLHGTGVGIRTIRGLGYMLEESHATASTTDAPPPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XALc_1768 YP_003376254.1 two-component system regulatory protein BAC0083 Protein 7e-31 43
XALc_1768 YP_003376254.1 two-component system regulatory protein BAC0638 Protein 5e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XALc_1768 YP_003376254.1 two-component system regulatory protein VFG0473 Protein 5e-40 45
XALc_1768 YP_003376254.1 two-component system regulatory protein VFG1390 Protein 4e-26 41