Gene Information

Name : XALc_1695 (XALc_1695)
Accession : YP_003376182.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : 1.1.1.-
Position : 1999941 - 2001227 bp
Length : 1287 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGTCGAAACTCTGTTCGATCCGTCCCCGCGTATTGCCGTCATCGGCCTCGGATATGTTGGCCTGCCGCTGGCGGT
GGCGTTCGGTGCGCGCTACGACACCCTTGGCTACGACATCGATGCACAACGGGTGGCACAACTGCGTGCTGGGTACGATC
AGACCTTGGAGATGCAGCCGGAGGAGTTGCGCGCTGGCGTACAGGTGCACTACAGCGACGATGTGGCCGCGTTGCGTGAC
CGCACGGTCTACATCGTCACCGTGCCGACCCCGATCGATGCGCAGGAGCAGCCGGACTTGCAGCCGCTGCGTCAGGCCAG
CCAATTGTTGGCTGGCGTACTCAAGCGCGGCGATCTGGTGATCTACGAATCTACGGTGTACCCGGGTACTACCGAGGAAG
TGTGCGTGCCGCTGCTGGAGCAGGGCTCGGGCTTGCGCTGCAACGTCGACTTTCATTGCGGCTACAGCCCGGAGCGGGTC
AGTCCCGGCGATCGCCAGCGGCGCCTCACCGATATACGCAAGATCACTTCCGGCTCCAATCCCACCGCTGCCGCAGCAGT
CGATGCGCTGTACGCGGAGATCATCACGGCCGGCACTTGGCGTGCGCCTTCGATCCGTGTAGCCGAGGCGGCCAAGGTGG
TGGAAAACATCCAGCGCGACGTCAATATCGCCCTGGTCAACGAATTGGCGTTGATCTTCGATCGGCTGGACATTGATACC
CACGATGTGTTGGAGGCAGCGGGTACCAAGTGGAACTTCCTGCCGTTCCGACCTGGTCTGGTTGGCGGCCATTGCATTGG
CGTGGACCCGTATTACTTGCTGCACAAGTCCGAAAGCGTCGGCTATCACCCGGATCTGATCCATACCGCGCGCAAGGTCA
ATAACCGGGTCGGCGCGCATGTCGCCGCGCGGGTGCAGGCGTTGCTGGCCGGCAAGGGCGTGCCGATGGTGGCGGCCCAT
GTACTTGTGCTCGGTGTCACCTTCAAGGAAAACTGCCCGGACTTGCGCAATAGTCGAGCGCTGGAATTGGTCCAGACGTT
GGCTGCCACCGGTGCCCGAGTGGACGCTTGCGACCCTTGGGCCGATCCGCAGGCTGCGCGTGCGCATGGCGTCGACCTGC
TGCCCGCGCCGGTCCCTGGTCGTTACGATGCGGTGGTGCTGGCGGTGGCGCACGATGCTTACCGCGGCTTCGCTGCCACG
CAGATTCGTGCGCTCGGTAACTCGGATCTAGTGGTCTACGACGTCAAATCGGTGTGGCCGCGCGAGGTGGTGGACGACCG
GCTGTAG

Protein sequence :
MPVETLFDPSPRIAVIGLGYVGLPLAVAFGARYDTLGYDIDAQRVAQLRAGYDQTLEMQPEELRAGVQVHYSDDVAALRD
RTVYIVTVPTPIDAQEQPDLQPLRQASQLLAGVLKRGDLVIYESTVYPGTTEEVCVPLLEQGSGLRCNVDFHCGYSPERV
SPGDRQRRLTDIRKITSGSNPTAAAAVDALYAEIITAGTWRAPSIRVAEAAKVVENIQRDVNIALVNELALIFDRLDIDT
HDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLLHKSESVGYHPDLIHTARKVNNRVGAHVAARVQALLAGKGVPMVAAH
VLVLGVTFKENCPDLRNSRALELVQTLAATGARVDACDPWADPQAARAHGVDLLPAPVPGRYDAVVLAVAHDAYRGFAAT
QIRALGNSDLVVYDVKSVWPREVVDDRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-107 52
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-107 52
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-93 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XALc_1695 YP_003376182.1 polysaccharide biosynthesis protein VFG0431 Protein 2e-107 52