Gene Information

Name : albV (XALc_1528)
Accession : YP_003376021.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Unknown
Product : isxal4 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1762523 - 1763239 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence :
ATGGACCTGCAGTGTGCGCGCATCGCCGCGCTGTGCGAGCAGTTGAAGCTGGCACGCCTGAGCTCGGACTGGCAAGCACT
CGCACAGGCCGCCGCGTGCGAGGATGCCAACTACTTCCTGGAGAAGGTGCTGGCAAGCGAACAGCTCGCGCGTGAAGAGC
GCAAGCGCACGGCGCTGACGCGACTTGCCAGGATGCCGTCCATCAAGACGCTGGAGCAGTTCGACTGGGCCCAGGCCGGC
GGCGCCTCGAAGGCGCAGATCGTCGAGCTCGGCCACCTGACCTTCGTCGAGCGCGCCGAGAACGTGGTGATGCTTGGCCC
CAGCGGTGTCGGCAAGACCCACATCGCCCCGGCGCTGTGCCAGCGTGCGGTGATGGCGGGGCACAAGGCACGTTTCATCA
CCGCGGCCGACCTGATGATGCAACTGGCAGCGGTCAAGGCGCAGAACCGGCTGAAGGACTACTTCAATCGCGCGGTACTC
GGGCCGAAGCTGCTGGTGGTCGACGAGATCGGCTACCTGCCCTTCGGGCGTGAGCCGGCGCAGGGCTGCTGGGCTGCGAC
GGGCTTTGCCCTGCGCAGTCTAGCAGCCCGATGGAAGACCCCGGGTGGGTCAGATTTACTTCGGCGATTCAAAGGAAAGT
GGGTCAAATTTAAATCGGCGTTGACAGCTGATGTGGTTTATCTCATCTTTCGCTTGCGTGGATCAGACCATCCGTAA

Protein sequence :
MDLQCARIAALCEQLKLARLSSDWQALAQAAACEDANYFLEKVLASEQLAREERKRTALTRLARMPSIKTLEQFDWAQAG
GASKAQIVELGHLTFVERAENVVMLGPSGVGKTHIAPALCQRAVMAGHKARFITAADLMMQLAAVKAQNRLKDYFNRAVL
GPKLLVVDEIGYLPFGREPAQGCWAATGFALRSLAARWKTPGGSDLLRRFKGKWVKFKSALTADVVYLIFRLRGSDHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-35 50
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-35 50
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-35 50
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-35 50
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-35 50
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-35 50
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 4e-35 50
unnamed CAA21402.1 - Not tested HPI Protein 4e-35 50
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 5e-35 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
albV YP_003376021.1 isxal4 transposase VFG1515 Protein 2e-35 50
albV YP_003376021.1 isxal4 transposase VFG1627 Protein 2e-35 50
albV YP_003376021.1 isxal4 transposase VFG1606 Protein 2e-35 50
albV YP_003376021.1 isxal4 transposase VFG1663 Protein 3e-35 49