Gene Information

Name : xicA (XALc_1503)
Accession : YP_003375998.1
Strain : Xanthomonas albilineans GPE PC73
Genome accession: NC_013722
Putative virulence/resistance : Virulence
Product : xsa-invasion chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1727021 - 1727536 bp
Length : 516 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGAAACAGAACAAAAATTTGATATGGAGGAATTAAATCGATTGAATAGATCGATCTTCGCGGCTATTCAGAAAGG
CGCGACGATCAAAGATTTGCACGGAGTGACGGATGCGGCGATGGAAGGGATGTATGCCTATGCCTATCGCTTCTACCAGC
AAGGGAAATTGAAAGAAGCAGAATCATTTTTCCGTTTCTTGTTTATGTACAATTTCCGTTGTGCGGAATACCCGATGGGG
CTGGCGGCGGTATATCAACTAAAAGGCGAATATCAGAAGGCTATCGAGTATTACGCGATAGCGAGTTCGCTGGCAAAGGA
TGACTTGCGGCCGATTTTCCACTCGGCGCAGTGCTACCTGTGCCTGGGAAAACGCTCCCTTGCGCGGCAAAACTTCGAGG
TTGTGCTGAAGTGCGCCGGTGAACAAGTGTTGAAAGATGCCGCAAAGGCTTGTCTCAACGTGATGGACAAGGATTTGCGC
CATGCCGAAACAGCATCTTTGGAGCAAGGAGACTAA

Protein sequence :
MSETEQKFDMEELNRLNRSIFAAIQKGATIKDLHGVTDAAMEGMYAYAYRFYQQGKLKEAESFFRFLFMYNFRCAEYPMG
LAAVYQLKGEYQKAIEYYAIASSLAKDDLRPIFHSAQCYLCLGKRSLARQNFEVVLKCAGEQVLKDAAKACLNVMDKDLR
HAETASLEQGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sycB AAS66850.1 SycB Not tested SSR-1 Protein 3e-20 48
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 2e-27 47
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 2e-27 47
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 2e-27 47
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 2e-27 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xicA YP_003375998.1 xsa-invasion chaperone protein VFG1769 Protein 1e-31 52
xicA YP_003375998.1 xsa-invasion chaperone protein VFG2451 Protein 2e-34 50
xicA YP_003375998.1 xsa-invasion chaperone protein VFG0547 Protein 6e-28 47