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Name : xsaW (XALc_1499) Accession : YP_003375994.1 Strain : Xanthomonas albilineans GPE PC73 Genome accession: NC_013722 Putative virulence/resistance : Virulence Product : xanthomonas secretion apparatus protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4790 EC number : - Position : 1724033 - 1724728 bp Length : 696 bp Strand : + Note : - DNA sequence : ATGATGCACAACCAAGAATTATCGCTAATCGCGCTGATCGCCGTCATGGCGCTGATTCCATTTCTGTTTGCATCGGGAAC ATGCTTCCTGAAATTTTCGGTTGTGTTCGTGTTGCTGCGTAATGCGATCGGCATGCAACAGGTTCCCAGCAATATGGTGT TGAACAGCATTGCGCTGATGCTCGCGGCTTTCGTCATGCAGCCCGTCATCACATCGACGTTTCATGCGTTCCAGGAAACC GATCAGGTCACCTCCATGGATGAGGTCGGTCCATACCTCACGACGGTGCTGACACCTTATCGGCAGTATCTGGCTAAGTA TGCGGACAAGGAGCTTGTGGAATTCTTTCAGCGAGTGCCGTCCACTGTCCAGAACACGCCCACCACTCCAGGGCAGGGCA CGGCCAACCAGAGTGCGATCCATCAAGTGCAGCAACCGTCACTGTATGCGCTATTGCCGGCCTATGGGCTGACCGAGTTG CGCGACGCCTTTCGCATCGGCTTCTATCTTTATCTGCCATTCGTGGTTATTGACCTGATCGTATCGAATGTGTTGCTGGC GCTCGGGATGATGATGATGAGCCCGGTAACGATCTCCATGCCGATCAAACTGATTCTTTTCGTGGCGCTCGATGGCTGGA CACTCGTGTCGAAGGACCTGATGGAACCGTATATGGCTTTTCACTCGGTGACGTGA Protein sequence : MMHNQELSLIALIAVMALIPFLFASGTCFLKFSVVFVLLRNAIGMQQVPSNMVLNSIALMLAAFVMQPVITSTFHAFQET DQVTSMDEVGPYLTTVLTPYRQYLAKYADKELVEFFQRVPSTVQNTPTTPGQGTANQSAIHQVQQPSLYALLPAYGLTEL RDAFRIGFYLYLPFVVIDLIVSNVLLALGMMMMSPVTISMPIKLILFVALDGWTLVSKDLMEPYMAFHSVT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 7e-54 | 54 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 7e-54 | 54 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 9e-54 | 53 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 9e-54 | 53 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 3e-59 | 53 |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 2e-55 | 50 |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 3e-54 | 49 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 4e-52 | 49 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 3e-34 | 44 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 2e-37 | 43 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-37 | 42 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 2e-36 | 42 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-37 | 42 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-37 | 42 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 3e-37 | 42 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 5e-37 | 42 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 3e-37 | 42 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 5e-37 | 42 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 3e-37 | 42 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-37 | 42 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 3e-37 | 42 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-37 | 42 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 9e-36 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG0551 | Protein | 4e-54 | 53 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG2455 | Protein | 5e-57 | 52 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG1012 | Protein | 9e-56 | 51 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG1773 | Protein | 3e-55 | 50 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG0394 | Protein | 2e-36 | 44 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG0715 | Protein | 1e-36 | 42 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG0827 | Protein | 2e-37 | 42 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG0188 | Protein | 6e-34 | 42 |
| xsaW | YP_003375994.1 | xanthomonas secretion apparatus protein | VFG0044 | Protein | 1e-32 | 41 |
