|
Name : lysS (XALc_1344) Accession : YP_003375839.1 Strain : Xanthomonas albilineans GPE PC73 Genome accession: NC_013722 Putative virulence/resistance : Virulence Product : lysine-tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1554274 - 1555791 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGACCGAGCAGACTCCCGCGCCCTCGCTTTCCGTCGACGAGAACAGCCTCATCGCCGAGCGGCGCGCCAAACTGGCTGC GTTACGCGCCCAGGGTGTGGCCTATCCGAACGATTTCCGTCGCAGCGACTTCGCCGGCGATGTGCAGGCCGAGTTTGCCG ACCTGGAGCGCTGGACCGCCGATGCGCTGGAAGCGCAGGGCCGTAGCCTGCGTCTGGCCGGGCGCCTGTTGGCCAAACGG GTCATGGGCAAGGCCAGCTTCGTGCAGTTGCAGGACGAGTCCGGGCGTATTCAGCTATACCTGCAGGCCAATGCGCTGGG CGCGGCCTACGATGCCTTCAAAGGCTGGGATATCGGCGACATCATCGCAGTGGAGGGTGGGCTCACCCGGACCAAGACCG GCGAGCTTTCGATCAAGGCGACCGCACTGCGGCTGCTGACCAAGGCGCTGCGTCCATTGCCGGATAAGTGGCATGGCCTG TCCGACGTGGAACAGCGCTACCGCCAGCGCTACGTGGACCTGATTGTGTCGCCGGAGGCGCGTGCGGTCTTCGTGAAGCG CTCCAAGATCATCCGCGCGATGCGCGCCTGGCTGGATGCGCGCCGCTTTTTGGAAGTGGAAACGCCAATGATGCATTACA TTCCCGGTGGTGCCACGGCCAAGCCATTCACCACCCACCACAATGCGTTGGATCTGGATCTGTACCTGCGCGTGGCCCCG GAGTTGTATCTGAAACGGCTGGTGGTCGGCGGCCTGGAGCGCGTTTACGAAATCAACCGTAACTTCCGTAACGAAGGCGT CAGTACCCGACATAATCCCGAATTCACCATGATGGAGTTGTACGAGGCCTATGCCACGTATCACGAGGTGATGGACCTGA CCGAGAGCGTCATCCGCGACGTCGCCCGCGACGTCCTCGGGACCACCCAGGTACACTGGGATGGCGTCGATATCGACCTG GGGCCGGCGTTTCGCCGCTGGCGCATGGACGAGGCCGTGCGCCACCATAATCCGCAGATCAGCACCGCCGATTGTACCGA CCGTGAGGCCTTAATACGCCACTGCGAGCGGCTGAAGATCCGGACCAAGCCGTCCTATGGTTGGGGCAAGCTGCTACTGG AAATCTTCGAGGCGACGGTCGAACCGACCTTGATCCAGCCGACCTTCATCACAGATCACCCGGTCGAGGTGTCGCCTCTG GCCCGCTCCAGCGACACGGAGCCTGGTTATACCGACCGCTTCGAATTGTTCATCAATGGCAAGGAAATCGCCAACGGGTT TTCCGAACTCAACGACCCGGAAGACCAGGCGGCGCGGTTTCAGGCCCAGGTTGCGGCGAAGGAGGGGGGGGACGACGAAG CCATGCATTTCGACGCCGATTACATCCGGGCGTTGGAAGTGGGCCTGCCGCCGACCGGTGGCCTGGGTATTGGCATCGAT CGTCTAGTCATGTTATTAACCGGAAGTGCCTCGATCCGTGACGTCCTGCTATTCCCGTACATGCGCCCTCAGGCTTAA Protein sequence : MTEQTPAPSLSVDENSLIAERRAKLAALRAQGVAYPNDFRRSDFAGDVQAEFADLERWTADALEAQGRSLRLAGRLLAKR VMGKASFVQLQDESGRIQLYLQANALGAAYDAFKGWDIGDIIAVEGGLTRTKTGELSIKATALRLLTKALRPLPDKWHGL SDVEQRYRQRYVDLIVSPEARAVFVKRSKIIRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAP ELYLKRLVVGGLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYHEVMDLTESVIRDVARDVLGTTQVHWDGVDIDL GPAFRRWRMDEAVRHHNPQISTADCTDREALIRHCERLKIRTKPSYGWGKLLLEIFEATVEPTLIQPTFITDHPVEVSPL ARSSDTEPGYTDRFELFINGKEIANGFSELNDPEDQAARFQAQVAAKEGGDDEAMHFDADYIRALEVGLPPTGGLGIGID RLVMLLTGSASIRDVLLFPYMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-106 | 54 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-67 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003375839.1 | lysine-tRNA ligase | VFG1668 | Protein | 5e-106 | 54 |
