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Name : HMPREF0424_0890 (HMPREF0424_0890) Accession : YP_003374106.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2011 EC number : - Position : 1011781 - 1012461 bp Length : 681 bp Strand : + Note : identified by match to protein family HMM PF00528 DNA sequence : ATGTTAGAAGCTGCTACACAATTTTTTAACGACTACGGCAACTTACTTATTGAAGGCGTGCAAGACACACTCGTAATGAC ATCAGTTGCAACACTTTTTGCATACCTTATTGGACTTCCAGTTGGCGTACTTCTCATTACATCAAACAAAAAAGGTATTT GCCCTAACGCGCCAATTAACGCAGTTCTAGGCTGGATTGTTAACATCGTGCGTTCAGTGCCGTTTATTATTTTATTAGTT GCAATAATTCCTTTCACTCGTCTCATAGTTGGCACTTCTTTGGGAGTTCCTGGAGCTATTGTGCCTCTGGTGATTACGGC TGCACCATTCGTTGCTAGAGTAGTTGAACAATCTTTAGCCGAAGTTGACGGAAGCTTAATTGAAGCAGCACAAAGCTTTG GAGCAAGCAAATTGCAAATTGTTTGCAAAGTATTGCTGTGGGAAGCTTTACCTTCGCTAATTCGCGGAGCTGCGCTTACA TTTATTACGCTTTTTGGATTCTCCGCAATGGCTGGAACAGTTGGCGCAGGCGGACTCGGAGATATTGCAATACGATACGG ATACCAGCGTTATCAATACGATGTGATGACAGTGGCTGTTATTCTTTGCATTATCCTCGTGCAGATTGTGCAAAGCTTGG GAGATTTTATTTCACGCGCAATCAATCATCACGAACGCTAA Protein sequence : MLEAATQFFNDYGNLLIEGVQDTLVMTSVATLFAYLIGLPVGVLLITSNKKGICPNAPINAVLGWIVNIVRSVPFIILLV AIIPFTRLIVGTSLGVPGAIVPLVITAAPFVARVVEQSLAEVDGSLIEAAQSFGASKLQIVCKVLLWEALPSLIRGAALT FITLFGFSAMAGTVGAGGLGDIAIRYGYQRYQYDVMTVAVILCIILVQIVQSLGDFISRAINHHER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0462 | YP_039911.1 | transport system membrane protein | Not tested | vSa¥á | Protein | 2e-30 | 51 |
| SAS0420 | YP_042547.1 | transport system membrane protein | Not tested | vSa¥á | Protein | 2e-30 | 51 |
