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Name : HMPREF0424_0888 (HMPREF0424_0888) Accession : YP_003374104.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : NLPA lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1009904 - 1010737 bp Length : 834 bp Strand : + Note : identified by match to protein family HMM PF03180 DNA sequence : ATGCGAAAAATTAAAGTTATTGCATCAATTACAGCACTGGCAGCATTAGCGACTTTCACTTTAAGTGGCTGCGGTAGCTC AAAAGCAGGCGCAAAGGATGACAAGACCATTACTGTTGCAGCTTCACCTACCCCGCATTCTGAAATCTTAAATAAAGTTG TAAAGCCAATCTTGCAAAAAGAAGGCTACAAGCTAGTAGTAAAGGAATTTACTGACTACGTGCAGCCAAATACAGCTACT GAAGAAGGCGAAGTTGACGCAAACTACTATCAGCATTTGCCTTATCTTGACAACTTTAATAAGGAAAAGGGAACTCACCT TGTTTCAGTAGGTGGAATTCATTTTGAACCATTTGGATTGTATCCAGGAAAAACCAAGACGATTAAAGCATTAGCAAACG GAGCAACTGTTGCAGTTCCAAATGATCCTACTAATGAGGCTCGCGCATTGCTTCTTTTGCAAGATGCCGGATTGATTAAG TTGAAGAATCCAAAGGATATTAACGCTACTACAAAAGATATTACTGAGAATCCTAAGAATTTGAAGTTTAAAGAACTTGA AGCGGCAACAGTTCCTACTGCCATTAAGGATGTGGATCTTGCTGCCATGAACGGCAATTACGCTATTCAAGCTGGTTTTA ACCCAACTAAAGACCCACTTACTTCAGAAAAAGTTGGAGGCATTGCGGCTAAAACTTATGAAAATATTATTGTAGTAAAG AAGGGCTCTGAAAAGTTTGCAAAAATCAAAGCCTTACTCAAAGCTTTGAAGACAAGCGAAGTGCGCGACTATATTACTAA AACTTACAAAGGCGCTGTGCTCCCTGTTTTCTAA Protein sequence : MRKIKVIASITALAALATFTLSGCGSSKAGAKDDKTITVAASPTPHSEILNKVVKPILQKEGYKLVVKEFTDYVQPNTAT EEGEVDANYYQHLPYLDNFNKEKGTHLVSVGGIHFEPFGLYPGKTKTIKALANGATVAVPNDPTNEARALLLLQDAGLIK LKNPKDINATTKDITENPKNLKFKELEAATVPTAIKDVDLAAMNGNYAIQAGFNPTKDPLTSEKVGGIAAKTYENIIVVK KGSEKFAKIKALLKALKTSEVRDYITKTYKGAVLPVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 3e-43 | 44 |
